RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 UNQ9370/PRO34162Q6UXP9 181 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 CEACAM19Q7Z692 300 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 CENPVQ7Z7K6 275 aaPredicted RBP14.04□□□□□ -0.16
NUP50-208ENST00000430547 NDUFA11Q86Y39 141 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 LYPD6Q86Y78 171 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 THNSL2Q86YJ6 484 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 PRR18Q8N4B5 295 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 SGCDQ92629 289 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 OCSTAMPQ9BR26 566 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 GFOD1Q9NXC2 390 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 GNG12Q9UBI6 72 aa14.04□□□□□ -0.16
NUP50-208ENST00000430547 PLXNB1O43157 2135 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 IGHV3-43A0A0B4J1X8 118 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 UBE2QL1A1L167 161 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 CCRL2O00421 344 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 PDCD6O75340 191 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 OPN1MWP04001 364 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 GAPDHP04406 335 aaKnown RBP14.03□□□□□ -0.16
NUP50-208ENST00000430547 GLAP06280 429 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 OPN1MW2P0DN77 364 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 OPN1MW3P0DN78 364 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 IGHV3-43DP0DP04 118 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 SRMP19623 302 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 VHLP40337 213 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 IZUMO2Q6UXV1 221 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 MOB3BQ86TA1 216 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 OR4F17Q8NGA8 305 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 OR5AU1Q8NGC0 362 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 OR4F4Q96R69 305 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 CITED2Q99967 270 aaPredicted RBP14.03□□□□□ -0.16
NUP50-208ENST00000430547 KCNIP1Q9NZI2 227 aa14.03□□□□□ -0.16
NUP50-208ENST00000430547 FAM90A9PA6NNJ1 464 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 C12orf77C9JDV5 145 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 IGKV1D-33P01593 117 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 IGKV1-33P01594 117 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 ZNF816Q0VGE8 651 aaPredicted RBP14.02□□□□□ -0.17
NUP50-208ENST00000430547 DIAPH2-AS1Q14236 149 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 IRF3Q14653 427 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 TRAM1Q15629 374 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.17
NUP50-208ENST00000430547 FBLN7Q53RD9 439 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 NKAPLQ5M9Q1 402 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 LRRTM1Q86UE6 522 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 LINC00311Q8N616 119 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 C8orf31Q8N9H6 132 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 WIPF2Q8TF74 440 aaPredicted RBP14.02□□□□□ -0.17
NUP50-208ENST00000430547 TMEM203Q969S6 136 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 R3HDM4Q96D70 268 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 NEDD4LQ96PU5 975 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 TMEM59Q9BXS4 323 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 DUSP21Q9H596 190 aa14.02□□□□□ -0.17
NUP50-208ENST00000430547 SH2D7A6NKC9 451 aaPredicted RBP14.01□□□□□ -0.17
NUP50-208ENST00000430547 SC5DO75845 299 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 HBZP02008 142 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 UCHL1P09936 223 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 PSMA1P25786 263 aaKnown RBP14.01□□□□□ -0.17
NUP50-208ENST00000430547 HTR2CP28335 458 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 REG1BP48304 166 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 LOXL3P58215 753 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 HNF4GQ14541 408 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 Q3ZCU0 254 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 C1QL4Q86Z23 238 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 OR4X2Q8NGF9 303 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 KCNG3Q8TAE7 436 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
NUP50-208ENST00000430547 IGHV1-3A0A0C4DH29 117 aa14□□□□□ -0.17
NUP50-208ENST00000430547 A0A1W2PRX2 142 aa14□□□□□ -0.17
NUP50-208ENST00000430547 ARL6IP5O75915 188 aa14□□□□□ -0.17
NUP50-208ENST00000430547 AMY1AP04745 511 aa14□□□□□ -0.17
NUP50-208ENST00000430547 AMY2AP04746 511 aa14□□□□□ -0.17
NUP50-208ENST00000430547 RCC1P18754 421 aaPredicted RBP14□□□□□ -0.17
NUP50-208ENST00000430547 CRHBPP24387 322 aa14□□□□□ -0.17
NUP50-208ENST00000430547 GP2P55259 537 aaKnown RBP14□□□□□ -0.17
NUP50-208ENST00000430547 MLLT11Q13015 90 aaPredicted RBP14□□□□□ -0.17
NUP50-208ENST00000430547 C1orf100Q5SVJ3 147 aa14□□□□□ -0.17
NUP50-208ENST00000430547 SIGIRRQ6IA17 410 aa14□□□□□ -0.17
NUP50-208ENST00000430547 PRSS48Q7RTY5 328 aa14□□□□□ -0.17
NUP50-208ENST00000430547 GAPTQ8N292 157 aa14□□□□□ -0.17
NUP50-208ENST00000430547 OR10V1Q8NGI7 309 aa14□□□□□ -0.17
NUP50-208ENST00000430547 OR6M1Q8NGM8 313 aa14□□□□□ -0.17
NUP50-208ENST00000430547 CNBD2Q96M20 576 aa14□□□□□ -0.17
NUP50-208ENST00000430547 PLGRKTQ9HBL7 147 aa14□□□□□ -0.17
NUP50-208ENST00000430547 TAF9BQ9HBM6 251 aa14□□□□□ -0.17
NUP50-208ENST00000430547 ISYNA1Q9NPH2 558 aa14□□□□□ -0.17
NUP50-208ENST00000430547 FGF16O43320 207 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 TXNL1O43396 289 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 VSIG8P0DPA2 414 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 RPS27AP62979 156 aaKnown RBP13.99□□□□□ -0.17
NUP50-208ENST00000430547 TPBGQ13641 420 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 KHDC1LQ5JSQ8 128 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 OR10K2Q6IF99 312 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 OR1L1Q8NH94 360 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 RTN4IP1Q8WWV3 396 aaPredicted RBP13.99□□□□□ -0.17
NUP50-208ENST00000430547 OR2S2Q9NQN1 319 aa13.99□□□□□ -0.17
NUP50-208ENST00000430547 IGHV3-72A0A0B4J1Y9 119 aa13.98□□□□□ -0.17
NUP50-208ENST00000430547 TCRBV4S1A1TA0A5B7 111 aa13.98□□□□□ -0.17
NUP50-208ENST00000430547 SLC22A1O15245 554 aa13.98□□□□□ -0.17
NUP50-208ENST00000430547 BPNT1O95861 308 aa13.98□□□□□ -0.17
NUP50-208ENST00000430547 PF4V1P10720 104 aa13.98□□□□□ -0.17
NUP50-208ENST00000430547 CPEP16870 476 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms