RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 GEMIN2O14893 280 aaKnown RBP12.72□□□□□ -0.37
COL18A1-205ENST00000423214 GPR12P47775 334 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 MPV17LQ2QL34 196 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 CXorf66Q5JRM2 361 aaPredicted RBP12.72□□□□□ -0.37
COL18A1-205ENST00000423214 ASCL4Q6XD76 172 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 STX19Q8N4C7 294 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 Q8NFD4 153 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 BPIFB6Q8NFQ5 453 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 GHSRQ92847 366 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 ABCG5Q9H222 651 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 TENM3Q9P273 2699 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 H0YHG0 523 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 TXNL1O43396 289 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 RPLP1P05386 114 aaKnown RBP12.71□□□□□ -0.37
COL18A1-205ENST00000423214 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 BDKRB2P30411 391 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 MED21Q13503 144 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 EBI3Q14213 229 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
COL18A1-205ENST00000423214 AHSA2Q719I0 299 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 ZNF485Q8NCK3 441 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 OR52M1Q8NGK5 317 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 CCDC107Q8WV48 283 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 RTN4IP1Q8WWV3 396 aaPredicted RBP12.71□□□□□ -0.37
COL18A1-205ENST00000423214 TFAP2CQ92754 450 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 SMIM19Q96E16 107 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 RAX2Q96IS3 184 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 DCLRE1BQ9H816 532 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 RAB9BQ9NP90 201 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 GFOD1Q9NXC2 390 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 PSORS1C1Q9UIG5 152 aa12.71□□□□□ -0.37
COL18A1-205ENST00000423214 A0A1W2PPK0 400 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 EFCAB10A6NFE3 127 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 C15orf65H3BRN8 121 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 RAMP3O60896 148 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 ZNF780AO75290 641 aaPredicted RBP12.7□□□□□ -0.38
COL18A1-205ENST00000423214 MOSP00540 346 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 RIPK1Q13546 671 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 GPR50Q13585 617 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 SLC22A6Q4U2R8 563 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 LINC00311Q8N616 119 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 C8orf31Q8N9H6 132 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 Q8N9W7 124 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 CKLFQ9UBR5 152 aa12.7□□□□□ -0.38
COL18A1-205ENST00000423214 LINC01548A6NM66 108 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 SPINT2O43291 252 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 ORC5O43913 435 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 GTF2F2P13984 249 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 VDAC1P21796 283 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 CD1BP29016 333 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 LUMP51884 338 aaPredicted RBP12.69□□□□□ -0.38
COL18A1-205ENST00000423214 RPS11P62280 158 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL18A1-205ENST00000423214 FOXE3Q13461 319 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 DOC2BQ14184 412 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 Q3ZCU0 254 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 ZNF497Q6ZNH5 498 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 Q8N6K4 173 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 NRG4Q8WWG1 115 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 ZNF184Q99676 751 aaPredicted RBP12.69□□□□□ -0.38
COL18A1-205ENST00000423214 VCXQ9H320 206 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 SPACA1Q9HBV2 294 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 PLCXD1Q9NUJ7 323 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 CNOT2Q9NZN8 540 aaKnown RBP12.69□□□□□ -0.38
COL18A1-205ENST00000423214 GNG12Q9UBI6 72 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 TRAPPC2LQ9UL33 140 aa12.69□□□□□ -0.38
COL18A1-205ENST00000423214 TRBV5-5A0A0J9YX44 114 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 A0A1W2PP11 408 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 ELANEP08246 267 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 VSIG8P0DPA2 414 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 GPR176Q14439 515 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 C6orf183Q5T699 404 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 LCNL1Q6ZST4 164 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 TMEM104Q8NE00 496 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 OR8H1Q8NGG4 311 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 PGLYRP3Q96LB9 341 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 S1PR3Q99500 378 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 ETAA1Q9NY74 926 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 SORL1Q92673 2214 aa12.68□□□□□ -0.38
COL18A1-205ENST00000423214 TRAV8-7A0A075B6U6 113 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 MAGEA13PA6NCF6 341 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 ERICH4A6NGS2 130 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 MCRIP1C9JLW8 97 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 PTGES3LE9PB15 166 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 MYL12BO14950 172 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 SLC31A2O15432 143 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 IGFBP3P17936 291 aaPredicted RBP12.67□□□□□ -0.38
COL18A1-205ENST00000423214 CELP19835 753 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 SOX6P35712 828 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 AQP4P55087 323 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms