RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 LINC00596Q86U02 117 aa11.61□□□□□ -0.55
RPS28-201ENST00000417088 OR8U1Q8NH10 309 aa11.61□□□□□ -0.55
RPS28-201ENST00000417088 RBMXL1Q96E39 390 aaKnown RBP11.61□□□□□ -0.55
RPS28-201ENST00000417088 S100A13Q99584 98 aa11.61□□□□□ -0.55
RPS28-201ENST00000417088 LSM4Q9Y4Z0 139 aaKnown RBP11.61□□□□□ -0.55
RPS28-201ENST00000417088 AIPO00170 330 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 NHLRC4P0CG21 123 aaPredicted RBP11.6□□□□□ -0.55
RPS28-201ENST00000417088 IGFBP3P17936 291 aaPredicted RBP11.6□□□□□ -0.55
RPS28-201ENST00000417088 IL3RAP26951 378 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 ETV1P50549 477 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 CFHR3Q02985 330 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 SMN1Q16637 294 aaKnown RBP11.6□□□□□ -0.55
RPS28-201ENST00000417088 Q3ZCU0 254 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 SLC22A6Q4U2R8 563 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 OR2G6Q5TZ20 316 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 ZNF439Q8NDP4 499 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 OR8H1Q8NGG4 311 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 OR5M8Q8NGP6 311 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 OR13C5Q8NGS8 318 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 NEK7Q8TDX7 302 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 RASL11BQ9BPW5 248 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 HSPB9Q9BQS6 159 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 C9orf16Q9BUW7 83 aa11.6□□□□□ -0.55
RPS28-201ENST00000417088 PAK1IP1Q9NWT1 392 aaPredicted RBP11.6□□□□□ -0.55
RPS28-201ENST00000417088 C12orf77C9JDV5 145 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 OGG1O15527 345 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 RRP9O43818 475 aaKnown RBP11.59□□□□□ -0.55
RPS28-201ENST00000417088 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
RPS28-201ENST00000417088 WBP4O75554 376 aaKnown RBP11.59□□□□□ -0.55
RPS28-201ENST00000417088 IGHG4P01861 327 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 GTF2F2P13984 249 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 VHLP40337 213 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 ZNF134P52741 427 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 ZNF137PP52743 207 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 F2RL1P55085 397 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 RIPK1Q13546 671 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 C9orf66Q5T8R8 295 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 SLC25A48Q6ZT89 311 aaKnown RBP11.59□□□□□ -0.55
RPS28-201ENST00000417088 FAM71E2Q8N5Q1 922 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 PRR25Q96S07 402 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 ZNF184Q99676 751 aaPredicted RBP11.59□□□□□ -0.55
RPS28-201ENST00000417088 SCOCQ9UIL1 159 aa11.59□□□□□ -0.55
RPS28-201ENST00000417088 STAB2Q8WWQ8 2551 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 MAGEA13PA6NCF6 341 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 TXNL1O43396 289 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 GPX5O75715 221 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 LALBAP00709 142 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 DCKP27707 260 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 SOX6P35712 828 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 NKAPLQ5M9Q1 402 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 SYT6Q5T7P8 510 aaPredicted RBP11.58□□□□□ -0.56
RPS28-201ENST00000417088 TMPRSS11AQ6ZMR5 421 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 STX19Q8N4C7 294 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 OR10V1Q8NGI7 309 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 SMIM19Q96E16 107 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 BABAM2Q9NXR7 383 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.56
RPS28-201ENST00000417088 TRAPPC2LQ9UL33 140 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 U3KQK5 164 aa11.58□□□□□ -0.56
RPS28-201ENST00000417088 SEC14L6B5MCN3 397 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 MCRIP1C9JLW8 97 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 SPINT2O43291 252 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 HBZP02008 142 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 IGF1P05019 195 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 VDAC1P21796 283 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 PSMB8P28062 276 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 ECI1P42126 302 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 FHL3Q13643 280 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 GPR176Q14439 515 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 GAPTQ8N292 157 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 OR1L1Q8NH94 360 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 C4orf3Q8WVX3 66 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 GHSRQ92847 366 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 KCTD7Q96MP8 289 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 SPACA1Q9HBV2 294 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 ETAA1Q9NY74 926 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 GNG12Q9UBI6 72 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 ZNF580Q9UK33 172 aa11.57□□□□□ -0.56
RPS28-201ENST00000417088 TRAV8-7A0A075B6U6 113 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 LANCL1O43813 399 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 RCC1P18754 421 aaPredicted RBP11.56□□□□□ -0.56
RPS28-201ENST00000417088 RPS11P62280 158 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPS28-201ENST00000417088 TMEM30BQ3MIR4 351 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 C6orf183Q5T699 404 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 DMKNQ6E0U4 476 aaPredicted RBP11.56□□□□□ -0.56
RPS28-201ENST00000417088 RAB12Q6IQ22 244 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 GLIPR1L1Q6UWM5 242 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 PRR18Q8N4B5 295 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 MUL1Q969V5 352 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 CYYR1Q96J86 154 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 S100A14Q9HCY8 104 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 RAB9BQ9NP90 201 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 CLEC2DQ9UHP7 191 aa11.56□□□□□ -0.56
RPS28-201ENST00000417088 ZNF107Q9UII5 783 aaPredicted RBP11.56□□□□□ -0.56
RPS28-201ENST00000417088 MRPS28Q9Y2Q9 187 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms