RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF141Q15928 474 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ATP6V1FQ16864 119 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 PLPPR5Q32ZL2 321 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ARHGAP11BQ3KRB8 267 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SLC36A2Q495M3 483 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ACSF3Q4G176 576 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 PHLDA2Q53GA4 152 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 AKIRIN2Q53H80 203 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 NCMAPQ5T1S8 102 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 IDNKQ5T6J7 187 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM91Q6ZNR0 172 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 LINC01551Q86U37 167 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 KIR2DL5AQ8N109 375 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OR6V1Q8N148 313 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF664Q8N3J9 261 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 C17orf78Q8N4C9 275 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ADAD2Q8NCV1 583 aaKnown RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OR10AD1Q8NGE0 317 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OR1L6Q8NGR2 347 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 OR1F12Q8NHA8 337 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 FGFBP3Q8TAT2 258 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SSC4DQ8WTU2 575 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SMAP2Q8WU79 429 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SLC38A5Q8WUX1 472 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ITLN2Q8WWU7 325 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 RND1Q92730 232 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 GHSRQ92847 366 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SARAFQ96BY9 339 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SMIM12Q96EX1 92 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 DNAJA3Q96EY1 480 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 IL4I1Q96RQ9 567 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 TIMP4Q99727 224 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 NRIP2Q9BQI9 281 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 URM1Q9BTM9 101 aaKnown RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 METTL17Q9H7H0 456 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 MMP26Q9NRE1 261 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 SERTAD4Q9NUC0 356 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 DCAF13Q9NV06 445 aaKnown RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF701Q9NV72 531 aaPredicted RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 UQCC1Q9NVA1 299 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 ICAM5Q9UMF0 924 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 PSG11Q9UQ72 335 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 MMP24Q9Y5R2 645 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 DIDO1Q9BTC0 2240 aaKnown RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 KIAA1549Q9HCM3 1950 aa3.87□□□□□ -1.79
SF3B1-202ENST00000409915 FLNBO75369 2602 aaKnown RBP3.87□□□□□ -1.79
SF3B1-202ENST00000409915 A0A0A6YYH2 397 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 NAP1L6A6NFF2 107 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 UNC119BA6NIH7 251 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 A6NJ64 397 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 TMEM178BH3BS89 294 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 MFNGO00587 321 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SIVA1O15304 175 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 EFNA2O43921 213 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 MPZL2O60487 215 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CA11O75493 328 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CLDN1O95832 211 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 PLAUP00749 431 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 GAPDHP04406 335 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CD5P06127 495 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SNRPCP09234 159 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 OR5AC1P0C628 307 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF35P13682 527 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF708P17019 499 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 RPS4Y1P22090 263 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 IL2RGP31785 369 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 P2RX1P51575 399 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CRISP3P54108 245 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CLDN17P56750 224 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ERVS71-1P61550 626 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 EWSR1Q01844 656 aaKnown RBP eCLIP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ST3GAL4Q11206 333 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 HNRNPA0Q13151 305 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 C5orf64Q2M2E5 130 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SCGB2B2Q4G0G5 96 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 COA6Q5JTJ3 125 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 MRPL2Q5T653 305 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF774Q6NX45 483 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 UNQ9370/PRO34162Q6UXP9 181 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ASCL4Q6XD76 172 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 DPY19L2P2Q6ZN68 376 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ZNF620Q6ZNG0 422 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 Q6ZRM9 215 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 SSX6Q7RTT6 188 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 MRPL21Q7Z2W9 205 aaKnown RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 MRGPRGQ86SM5 289 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 CALHM3Q86XJ0 350 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 FAM89BQ8N5H3 189 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 KCNRGQ8N5I3 272 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 C9orf106Q8NAJ2 232 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 OR10D4PQ8NGN7 298 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 OR52P1PQ8NH57 321 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 OR5W2Q8NH69 310 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 HAVCR2Q8TDQ0 301 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 GPR119Q8TDV5 335 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 HSD17B8Q92506 261 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 ARL11Q969Q4 196 aa3.86□□□□□ -1.79
SF3B1-202ENST00000409915 PACRGQ96M98 296 aaPredicted RBP3.86□□□□□ -1.79
SF3B1-202ENST00000409915 KCTD7Q96MP8 289 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms