RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 TLNRD1Q9H1K6 362 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 hCG_38984A0A1B0GV85 526 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 SNRPGP15A8MWD9 76 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 WISP3O95389 354 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CTSDP07339 412 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 MAGEB1P43366 347 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CLDN18P56856 261 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 TPPP2P59282 170 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 MGAT2Q10469 447 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ASAH1Q13510 395 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CLEC12BQ2HXU8 276 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 OR10Z1Q8NGY1 313 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 NTNG2Q96CW9 530 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 NPFFR1Q9GZQ6 430 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 SLC25A32Q9H2D1 315 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 RHOFQ9HBH0 211 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CCL28Q9NRJ3 127 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 SPRR3Q9UBC9 169 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 HIGD1AQ9Y241 93 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 IGLV3-12A0A075B6K2 115 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 KRBOX1C9JBD0 128 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 SOCS1O15524 211 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CST7O76096 145 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 IL18BPO95998 194 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ROM1Q03395 351 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 GAMTQ14353 236 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 TMEM41BQ5BJD5 291 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 LYSMD2Q8IV50 215 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 LILRB4Q8NHJ6 448 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ASB13Q8WXK3 278 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 RBPMSQ93062 196 aaKnown RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 KCNK15Q9H427 330 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 V9GYS6 101 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 A0A0A6YYJ9 748 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 DHRS7CA6NNS2 312 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ORM1P02763 201 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 MMP16P51512 607 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 TM4SF20Q53R12 229 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 DMKNQ6E0U4 476 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 DRAXINQ8NBI3 349 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 OR4A5Q8NH83 315 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 DTD1Q8TEA8 209 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 TMEM186Q96B77 213 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CTHRC1Q96CG8 243 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ADAT3Q96EY9 351 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 SCMH1Q96GD3 660 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ZMAT5Q9UDW3 170 aaKnown RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 J3QR06 171 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 KCNAB3O43448 404 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 ZIC3O60481 467 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 EFEMP2O95967 443 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 TTRP02766 147 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 USF1P22415 310 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 KIR3DL2P43630 455 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 RPS10P46783 165 aaKnown RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 LHX2P50458 406 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 RPL30P62888 115 aaKnown RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 NSUN5P1Q3KNT7 163 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 LIAT1Q6ZQX7 453 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 SVBPQ8N300 66 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 OR4P4Q8NGL7 312 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 OR10J6PQ8NGY7 276 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 OR4X1Q8NH49 305 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 MARVELD3Q96A59 401 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 EAF1Q96JC9 268 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 C16orf92Q96LL3 132 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 NPAS1Q99742 590 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 CYB5R1Q9UHQ9 305 aa4.32□□□□□ -1.72
SCN3A-203ENST00000409101 GREB1LQ9C091 1923 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-203ENST00000409101 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 FAM181BA6NEQ2 426 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SMLR1H3BR10 107 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PPOXP50336 477 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PLAC9Q5JTB6 97 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 TOR2AQ5JU69 321 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 C10orf128Q5T292 105 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 MMD2Q8IY49 270 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 RPUSD4Q96CM3 377 aaKnown RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 TECRQ9NZ01 308 aaKnown RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 RNASEK-C17orf49H0YIS7 233 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 TIMP3P35625 211 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PLAURQ03405 335 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PRSS53Q2L4Q9 553 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SNAI3Q3KNW1 292 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 MYPOPQ86VE0 399 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ZNF645Q8N7E2 425 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 PRSS27Q9BQR3 290 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 ODAMA1E959 279 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 IGF2P01344 180 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 UBE2L3P68036 154 aaKnown RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 LSM11P83369 360 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 INSL4Q14641 139 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SLC25A53Q5H9E4 307 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 C1QTNF12Q5T7M4 302 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 RPUSD3Q6P087 351 aaKnown RBP4.31□□□□□ -1.72
SCN3A-203ENST00000409101 COLCA1Q6ZS62 124 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 SAXO1Q8IYX7 474 aa4.31□□□□□ -1.72
SCN3A-203ENST00000409101 CELF2-AS1Q8N7Q2 184 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms