RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 MED13LQ71F56 2210 aa4.32□□□□□ -1.72
HDAC9-204ENST00000406451 EXOSC2Q13868 293 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PRSS53Q2L4Q9 553 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 RPS4Y2Q8TD47 263 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ATP5SQ99766 215 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 SAV1Q9H4B6 383 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 SH2D2AQ9NP31 389 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 AKIP1Q9NQ31 210 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 NAGKQ9UJ70 344 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PITPNC1Q9UKF7 332 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 A0A0G2JMM0 328 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 A0A1W2PPB8 328 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 A0A1W2PRS3 328 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 KIR3DP1A8MWS1 328 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CYB5R3P00387 301 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 H3F3AP84243 136 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 BTNL8Q6UX41 500 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CCDC190Q86UF4 302 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ZBTB34Q8NCN2 500 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PCNPQ8WW12 178 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 TMEM45BQ96B21 275 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 NUP210Q8TEM1 1887 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 TRAV39A0A0B4J263 110 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PPYP01298 95 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 TTRP02766 147 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 SLC25A5P05141 298 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 APELAP0DMC3 54 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 SUCLG1P53597 346 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 BSPH1Q075Z2 132 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 BAK1Q16611 211 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 DCAF12L2Q5VW00 463 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 GAPTQ8N292 157 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ZNF439Q8NDP4 499 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 NTNG2Q96CW9 530 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 LINC00470Q9BZP3 86 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 GAB2Q9UQC2 676 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 KLHDC2Q9Y2U9 406 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 KPTNQ9Y664 436 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 A0A1W2PPE3 182 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 C9orf170A2RU37 121 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 LEUTXA8MZ59 168 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 H0Y8G0 127 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 NTN3O00634 580 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 EFEMP2O95967 443 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 IGF2P01344 180 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 MRPL14Q6P1L8 145 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 DYRK2Q92630 601 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 GPA33Q99795 319 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 WDR61Q9GZS3 305 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PRDM14Q9GZV8 571 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CLEC5AQ9NY25 188 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 TRAV8-7A0A075B6U6 113 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 LIMS1P48059 325 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 RPS4XP62701 263 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ACSF3Q4G176 576 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 VWA1Q6PCB0 445 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 FAM168AQ92567 244 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 RNASE6Q93091 150 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 WDFY2Q96P53 400 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 LHFPL6Q9Y693 200 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 TMEM229AB2RXF0 380 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 BCL2L11O43521 198 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 S100A8P05109 93 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 MPV17P39210 176 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CFHR1Q03591 330 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ENDOGQ14249 297 aaKnown RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CEBPEQ15744 281 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ZNF826PQ6ZT77 177 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 SSX7Q7RTT5 188 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 BAP18Q8IXM2 172 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 C1orf162Q8NEQ5 155 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 OR10A7Q8NGE5 316 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 OR5C1Q8NGR4 320 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 MITD1Q8WV92 249 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 SNX22Q96L94 193 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 RNF2Q99496 336 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 OR51I2Q9H344 312 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ASCL3Q9NQ33 180 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PDGFAP04085 211 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 LSM11P83369 360 aaKnown RBP eCLIP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 TBR1Q16650 682 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 GGNBP1Q5YKI7 109 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 RABAC1Q9UI14 185 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ZMIZ1Q9ULJ6 1067 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 V9GYS6 101 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 IGLV3-12A0A075B6K2 115 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 A0A1B0GVG6 124 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 J3QW42 95 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 CD37P11049 281 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 FGF12P61328 243 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ATP6V1FQ16864 119 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 Q8WTZ3 238 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 ZNF107Q9UII5 783 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-204ENST00000406451 URGCP-MRPS24S4R325 110 aa4.31□□□□□ -1.72
HDAC9-204ENST00000406451 PIEZO1Q92508 2521 aa4.3□□□□□ -1.72
HDAC9-204ENST00000406451 PPIAL4CA0A0B4J2A2 164 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms