RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FAM240AA0A1B0GVK7 77 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 TINCRA0A1B0GVN0 87 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGSF23A1L1A6 192 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM25AB3EWG3 89 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM25CB3EWG5 89 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM25GB3EWG6 89 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 C5orf58C9J3I9 102 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 C15orf65H3BRN8 121 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 GPR31O00270 319 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 TP53I11O14683 189 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 PSPHP1O15172 72 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC31A1O15431 190 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 DCTN3O75935 186 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC22A5O76082 557 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 MT-CO2P00403 227 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 CD8AP01732 235 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 P01737 135 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 TYMSP04818 313 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 CYBAP13498 195 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 PSMD8P48556 350 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 EVX1P49640 407 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 RAP1AP62834 184 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 GNG3P63215 75 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 PRKCDQ05655 676 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 INCA1Q0VD86 236 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 PNOCQ13519 176 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF235Q14590 738 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 RNASE10Q5GAN6 216 aaKnown RBP3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR10J3Q5JRS4 329 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 RESP18Q5W5W9 173 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM131AQ6UXB0 335 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 Q6ZT83 130 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 MKXQ8IYA7 352 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC35F6Q8N357 371 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF676Q8N7Q3 588 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 SFXN5Q8TD22 340 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 HAVCR2Q8TDQ0 301 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 RXFP4Q8TDU9 374 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 DNAJC9Q8WXX5 260 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 C12orf43Q96C57 262 aaKnown RBP3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 KCNS1Q96KK3 526 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 PDCD1LG2Q9BQ51 273 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 EMC6Q9BV81 110 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 ARL6Q9H0F7 186 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR52D1Q9H346 318 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 RDH14Q9HBH5 336 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 HEBP1Q9NRV9 189 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 HES2Q9Y543 173 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 RFNGQ9Y644 331 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 WSB1Q9Y6I7 421 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 TMEM131Q92545 1883 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 ABCA10Q8WWZ4 1543 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 BCL9O00512 1426 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMG6Q86US8 1419 aaKnown RBP3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 SYNMO15061 1565 aa3.17□□□□□ -1.9
HMGB1P13-201ENST00000406019 AKAP12Q02952 1782 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 A0A1B0GX12 115 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 EFCAB9A8MZ26 197 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 J3QT63 122 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR10J4P0C629 311 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 C1GALT1C1LP0DN25 315 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 ESDP10768 282 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 PSG2P11465 335 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 MDKP21741 143 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 DDTP30046 118 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 S100A11P31949 105 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 AQP5P55064 265 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 RAB2AP61019 212 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 CKS1BP61024 79 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 RRAS2P62070 204 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 CDK5Q00535 292 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 LOXL1Q08397 574 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF616Q08AN1 781 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 GUSBP1Q15486 140 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 PRSS8Q16651 343 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 PLPPR5Q32ZL2 321 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SPIN4Q56A73 249 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 HENMT1Q5T8I9 393 aaKnown RBP3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SSX6Q7RTT6 188 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC36A1Q7Z2H8 476 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 COMMD7Q86VX2 200 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZBTB8OSQ8IWT0 167 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR4P4Q8NGL7 312 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 COQ8AQ8NI60 647 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SPPL2BQ8TCT7 592 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 RAB8BQ92930 207 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMIM19Q96E16 107 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 Q96MT0 163 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 C18orf15Q96N68 181 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SERPINI1Q99574 410 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 SFXN3Q9BWM7 321 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 MS4A8Q9BY19 250 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 COA1Q9GZY4 146 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 DDIT4Q9NX09 232 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 ANAPC11Q9NYG5 84 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 RASL12Q9NYN1 266 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 PYCARDQ9ULZ3 195 aa3.16□□□□□ -1.9
HMGB1P13-201ENST00000406019 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms