RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CRYBG3Q68DQ2 2970 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 ZNF729A6NN14 1252 aaPredicted RBP11.35□□□□□ -0.59
VAPB-202ENST00000395802 WNT2P09544 360 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 SELLP14151 372 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 HTD2P86397 168 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 LPCAT3Q6P1A2 487 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 LYPD2Q6UXB3 125 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 TPRX1Q8N7U7 411 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 OR13C8Q8NGS7 320 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 ARL11Q969Q4 196 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 KIRREL1Q96J84 757 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 ZNF2Q9BSG1 426 aaPredicted RBP11.35□□□□□ -0.59
VAPB-202ENST00000395802 TRBV6-7A0A0A0MS04 114 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 C12orf77C9JDV5 145 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
VAPB-202ENST00000395802 BET1O15155 118 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 PRAF2O60831 178 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 CCNKO75909 580 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 FCGR2CP31995 323 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 HERV-K104P61576 105 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 RRAS2P62070 204 aaPredicted RBP11.35□□□□□ -0.59
VAPB-202ENST00000395802 GNB2P62879 340 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 ESCO2Q56NI9 601 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 Q6ZPA2 131 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 ZDHHC22Q8N966 263 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 OR10A7Q8NGE5 316 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 H1FXQ92522 213 aaKnown RBP11.35□□□□□ -0.59
VAPB-202ENST00000395802 MRGPRFQ96AM1 343 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 PERPQ96FX8 193 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 ST6GAL2Q96JF0 529 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 DMRTB1Q96MA1 342 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 LIME1Q9H400 295 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
VAPB-202ENST00000395802 GCN1Q92616 2671 aaKnown RBP11.34□□□□□ -0.59
VAPB-202ENST00000395802 SPG11Q96JI7 2443 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 KBTBD11-OT1A0A1B0GTJ5 212 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 A0A1B0GW55 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 hCG_1809904A0A1W2PP81 198 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 A0A1W2PPE2 198 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 A0A1W2PR64 198 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 A0A1W2PRV1 198 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 RGS11O94810 467 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 HBZP02008 142 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 ANXA7P20073 488 aaKnown RBP11.34□□□□□ -0.59
VAPB-202ENST00000395802 IGSF11Q5DX21 431 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4L9Q6RFH8 374 aaPredicted RBP11.34□□□□□ -0.59
VAPB-202ENST00000395802 GLDNQ6ZMI3 551 aaPredicted RBP11.34□□□□□ -0.59
VAPB-202ENST00000395802 SSBP3Q9BWW4 388 aaPredicted RBP11.34□□□□□ -0.59
VAPB-202ENST00000395802 BEX2Q9BXY8 128 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 BPESC1Q9GZL8 116 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 BEX1Q9HBH7 125 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
VAPB-202ENST00000395802 CENPEQ02224 2701 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 FAM172BPA6NC97 362 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 CBX3Q13185 183 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 WDR25Q64LD2 544 aaPredicted RBP11.33□□□□□ -0.6
VAPB-202ENST00000395802 C11orf88Q6PI97 169 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 LHFPL1Q86WI0 220 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 ZFAND1Q8TCF1 268 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 MBD6Q96DN6 1003 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 ZNF714Q96N38 554 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 DCTN5Q9BTE1 182 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 OR2S2Q9NQN1 319 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 CALYQ9NYX4 217 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 JPT1Q9UK76 154 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 TACC2O95359 2948 aa11.33□□□□□ -0.6
VAPB-202ENST00000395802 IL5P05113 134 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 FPR2P25090 351 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 DEFB113Q30KQ7 82 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 METTL11BQ5VVY1 283 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 ZNF660Q6AZW8 331 aaPredicted RBP11.32□□□□□ -0.6
VAPB-202ENST00000395802 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 C10orf105Q8TEF2 133 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 EDARADDQ8WWZ3 215 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 ZNF69Q9UC07 566 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 ZNF221Q9UK13 617 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 OR2W1Q9Y3N9 320 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 PTPN13Q12923 2485 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 TRAV39A0A0B4J263 110 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 F5H0A9 414 aaPredicted RBP11.32□□□□□ -0.6
VAPB-202ENST00000395802 C15orf65H3BRN8 121 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 F2RL2O00254 374 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 PPYP01298 95 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 RLN1P04808 185 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 VSIG10L2P0DP72 767 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 SLC25A16P16260 332 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 S100GP29377 79 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 SSTR5P35346 364 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 CEACAM6P40199 344 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms