RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PLSCR3Q9NRY6 295 aa13.25□□□□□ -0.29
SMN2-201ENST00000380741 SMPD3Q9NY59 655 aaPredicted RBP13.25□□□□□ -0.29
SMN2-201ENST00000380741 RCC2Q9P258 522 aaKnown RBP13.25□□□□□ -0.29
SMN2-201ENST00000380741 CLEC2DQ9UHP7 191 aa13.25□□□□□ -0.29
SMN2-201ENST00000380741 RYR3Q15413 4870 aa13.25□□□□□ -0.29
SMN2-201ENST00000380741 TRAV8-7A0A075B6U6 113 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 TRBV5-5A0A0J9YX44 114 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 C12orf77C9JDV5 145 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 MYL12AP19105 171 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 CD1BP29016 333 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 PNLIPRP3Q17RR3 467 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 Q3ZCU0 254 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 DMKNQ6E0U4 476 aaPredicted RBP13.24□□□□□ -0.29
SMN2-201ENST00000380741 STX19Q8N4C7 294 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
SMN2-201ENST00000380741 S1PR3Q99500 378 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 DCLRE1BQ9H816 532 aa13.24□□□□□ -0.29
SMN2-201ENST00000380741 DIMT1Q9UNQ2 313 aaKnown RBP13.24□□□□□ -0.29
SMN2-201ENST00000380741 IRGMA1A4Y4 181 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 CCL24O00175 119 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 GPX5O75715 221 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 MOSP00540 346 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 ZNF134P52741 427 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 RAB25P57735 213 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 RPS11P62280 158 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMN2-201ENST00000380741 GPR50Q13585 617 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 Q499Y3 187 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 YIF1BQ5BJH7 314 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 SYT6Q5T7P8 510 aaPredicted RBP13.23□□□□□ -0.29
SMN2-201ENST00000380741 UNQ9370/PRO34162Q6UXP9 181 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 SLC25A48Q6ZT89 311 aaKnown RBP13.23□□□□□ -0.29
SMN2-201ENST00000380741 ZFP41Q8N8Y5 198 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 MUL1Q969V5 352 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 PGLYRP3Q96LB9 341 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 RDH12Q96NR8 316 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 SPACA1Q9HBV2 294 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMN2-201ENST00000380741 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
SMN2-201ENST00000380741 EXOSC1Q9Y3B2 195 aaKnown RBP13.23□□□□□ -0.29
SMN2-201ENST00000380741 MCRIP1C9JLW8 97 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 SPINT2O43291 252 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 BAG2O95816 211 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 FSTP19883 344 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 ZNF137PP52743 207 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 DGCR2P98153 550 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 FOXE3Q13461 319 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 GPR176Q14439 515 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 CXorf66Q5JRM2 361 aaPredicted RBP13.22□□□□□ -0.29
SMN2-201ENST00000380741 RAB12Q6IQ22 244 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 GLIPR1L1Q6UWM5 242 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 PRR18Q8N4B5 295 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 FAM71E2Q8N5Q1 922 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 RNF152Q8N8N0 203 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 OR4K15Q8NH41 348 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 OR1L1Q8NH94 360 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 TFAP2CQ92754 450 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 OR14A2Q96R54 314 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 RASL11BQ9BPW5 248 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 HSPB9Q9BQS6 159 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 GNG12Q9UBI6 72 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 TRAPPC2LQ9UL33 140 aa13.22□□□□□ -0.29
SMN2-201ENST00000380741 MRPS28Q9Y2Q9 187 aaKnown RBP13.22□□□□□ -0.29
SMN2-201ENST00000380741 A0A1W2PPK0 400 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 TXNL1O43396 289 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
SMN2-201ENST00000380741 VHLP40337 213 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 CDX1P47902 265 aaPredicted RBP13.21□□□□□ -0.29
SMN2-201ENST00000380741 LUMP51884 338 aaPredicted RBP13.21□□□□□ -0.29
SMN2-201ENST00000380741 F2RL1P55085 397 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 CFHR3Q02985 330 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 DCTN2Q13561 401 aaKnown RBP13.21□□□□□ -0.29
SMN2-201ENST00000380741 CT45A1Q5HYN5 189 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 C6orf183Q5T699 404 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 GAPTQ8N292 157 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 ZNF485Q8NCK3 441 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 OR8H1Q8NGG4 311 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 OR8U1Q8NH10 309 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 CT45A3Q8NHU0 189 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.29
SMN2-201ENST00000380741 TMEM80Q96HE8 168 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 CYYR1Q96J86 154 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 RAB9BQ9NP90 201 aa13.21□□□□□ -0.29
SMN2-201ENST00000380741 TRBV5-7A0A0A0MS05 114 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 HBZP02008 142 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 ELANEP08246 267 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
SMN2-201ENST00000380741 SOX6P35712 828 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 GP2P55259 537 aaKnown RBP13.2□□□□□ -0.3
SMN2-201ENST00000380741 KIR2DS1Q14954 304 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 TMEM30BQ3MIR4 351 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 AWAT2Q6E213 333 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 BANF2Q9H503 90 aa13.2□□□□□ -0.3
SMN2-201ENST00000380741 CHCHD3Q9NX63 227 aaKnown RBP13.2□□□□□ -0.3
SMN2-201ENST00000380741 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms