RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 C8orf44Q96CB5 159 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 ST3GAL6Q9Y274 331 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 SHISA7A6NL88 538 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 NUDT3O95989 172 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 PPYP01298 95 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 ERGP11308 486 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 MFAP5Q13361 173 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 OR10V1Q8NGI7 309 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 GLRX2Q9NS18 164 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 CACNG5Q9UF02 275 aa9.51□□□□□ -0.89
USP6NL-202ENST00000379237 ERRFI1Q9UJM3 462 aaPredicted RBP9.51□□□□□ -0.89
USP6NL-202ENST00000379237 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 M0R2Z0 102 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 IL15RAQ13261 267 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 PRSS8Q16651 343 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 AMMECR1LQ6DCA0 310 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 C12orf76Q8N812 135 aaPredicted RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 OR1K1Q8NGR3 316 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 RHBDD1Q8TEB9 315 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 PIGCQ92535 297 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 TMEM204Q9BSN7 226 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 PLEKHA3Q9HB20 300 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 IGKV1D-8A0A087WSZ0 117 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 IGLV1-36A0A0B4J1U3 117 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 LOC102725191A0A1B0GVB3 256 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 GPR3P46089 330 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 UBE2NP61088 152 aaKnown RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 SERF2P84101 59 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 OR5D13Q8NGL4 314 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 DDIT4LQ96D03 193 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 BMFQ96LC9 184 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 NUDT16L1Q9BRJ7 211 aaKnown RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 CCNOP22674 350 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 COA6Q5JTJ3 125 aaKnown RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 Q6ZWC4 215 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 OR2Y1Q8NGV0 311 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 RNF133Q8WVZ7 376 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 CSTL1Q9H114 145 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 TBC1D29Q9UFV1 150 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 MDC1Q14676 2089 aaKnown RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 WIPF3A6NGB9 483 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 NPIPA3F8WFD2 350 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 TMEM250H0YL14 139 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 PRSS12P56730 875 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 LINC00114Q6XXX2 140 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 NT5CQ8TCD5 201 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
USP6NL-202ENST00000379237 OR2A5Q96R48 311 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
USP6NL-202ENST00000379237 COL4A5P29400 1685 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 PROB1E7EW31 1015 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 SIRPB1O00241 398 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 PLP1P60201 277 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.49□□□□□ -0.89
USP6NL-202ENST00000379237 GAPTQ8N292 157 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 FAM19A2Q8N3H0 131 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 VSTM2LQ96N03 204 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 CHRDL1Q9BU40 450 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 SLC45A2Q9UMX9 530 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 COL16A1Q07092 1604 aaPredicted RBP9.49□□□□□ -0.89
USP6NL-202ENST00000379237 ODAMA1E959 279 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 SYNGR2O43760 224 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 LILRA1O75019 489 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 C9orf50Q5SZB4 431 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 PLCXD3Q63HM9 321 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 MRPL54Q6P161 138 aaKnown RBP9.49□□□□□ -0.89
USP6NL-202ENST00000379237 RNF144BQ7Z419 303 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 C1QL2Q7Z5L3 287 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 BPTFQ12830 3046 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 SLC25A6P12236 298 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 FBLP22087 321 aaKnown RBP9.49□□□□□ -0.89
USP6NL-202ENST00000379237 SOX8P57073 446 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 PMCHL1Q16048 86 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 IZUMO4Q1ZYL8 232 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 OR6C1Q96RD1 312 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 TMEM222Q9H0R3 208 aa9.49□□□□□ -0.89
USP6NL-202ENST00000379237 J3QR89 54 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 PRRX1P54821 245 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 EGR4Q05215 589 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 FHL5Q5TD97 284 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 C17orf99Q6UX52 265 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 UNC13CQ8NB66 2214 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 TMEM74BQ9NUR3 256 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 ZNF319Q9P2F9 582 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 MKI67P46013 3256 aaKnown RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 RPS21P63220 83 aaKnown RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 TMEM52BQ4KMG9 183 aa9.48□□□□□ -0.89
USP6NL-202ENST00000379237 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
USP6NL-202ENST00000379237 APOOQ9BUR5 198 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms