RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 A0A0G2JRQ6 117 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 PGLYRP1O75594 196 aaPredicted RBP11.04□□□□□ -0.64
USP11-204ENST00000377107 TMEM50AO95807 157 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 CLDN18P56856 261 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 MPV17LQ2QL34 196 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 ZNF343Q6P1L6 599 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 HEATR1Q9H583 2144 aaKnown RBP11.04□□□□□ -0.64
USP11-204ENST00000377107 PQLC2LA1A4F0 135 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 VDAC1P21796 283 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 CCL11P51671 97 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 GNG3P63215 75 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 SRPXP78539 464 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 ZNF816Q0VGE8 651 aaPredicted RBP11.04□□□□□ -0.64
USP11-204ENST00000377107 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 PRDM14Q9GZV8 571 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 RBFOX3A6NFN3 312 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 DEFB108AA8MXU0 73 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 AGFG2O95081 481 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 C4orf17Q53FE4 359 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
USP11-204ENST00000377107 IGHV3-43A0A0B4J1X8 118 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 B4E171 279 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 CLDN1O95832 211 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 IGHV3-43DP0DP04 118 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 BMP5P22003 454 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 TUBG1P23258 451 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 CEACAM6P40199 344 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 TSPAN7P41732 249 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 FABP6P51161 128 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 HABP2Q14520 560 aaPredicted RBP11.03□□□□□ -0.64
USP11-204ENST00000377107 ZNF573Q86YE8 665 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 GPR146Q96CH1 333 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 GINS3Q9BRX5 216 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 DLL3Q9NYJ7 618 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 TINAGQ9UJW2 476 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 MDKP21741 143 aaPredicted RBP11.03□□□□□ -0.64
USP11-204ENST00000377107 MEOX2P50222 304 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 RND3P61587 244 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 OR4D5Q8NGN0 318 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 STRAPQ9Y3F4 350 aaKnown RBP11.03□□□□□ -0.64
USP11-204ENST00000377107 ATP23Q9Y6H3 246 aa11.03□□□□□ -0.64
USP11-204ENST00000377107 CDS2O95674 445 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 ARR3P36575 388 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 WNT5AP41221 380 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 NDUFA6P56556 154 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 RAB2AP61019 212 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 TESK1Q15569 626 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 OR1J1Q8NGS3 322 aa11.02□□□□□ -0.64
USP11-204ENST00000377107 PKDREJQ9NTG1 2253 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 CYC1P08574 325 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 F2RP25116 425 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 EDDM3AQ14507 147 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 BTNL3Q6UXE8 466 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 LILRB1Q8NHL6 650 aaPredicted RBP11.02□□□□□ -0.65
USP11-204ENST00000377107 WSB1Q9Y6I7 421 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 KLRC4-KLRK1H3BQV0 150 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 RAB5AP20339 215 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 IL2RGP31785 369 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 GABRA2P47869 451 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 HOXA1P49639 335 aaPredicted RBP11.02□□□□□ -0.65
USP11-204ENST00000377107 OR5A2Q8NGI9 324 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 OR2W1Q9Y3N9 320 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 ADAMTS20P59510 1910 aa11.02□□□□□ -0.65
USP11-204ENST00000377107 TRAV24A0A0B4J272 114 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 H3BQ15 152 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 CD46P15529 392 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 EIF3IQ13347 325 aaKnown RBP11.01□□□□□ -0.65
USP11-204ENST00000377107 ASCL4Q6XD76 172 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 ZNF429Q86V71 674 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 OR10V1Q8NGI7 309 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 POM121L2Q96KW2 1035 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 ZFHX2Q9C0A1 2572 aaPredicted RBP11.01□□□□□ -0.65
USP11-204ENST00000377107 KIAA0141Q14154 515 aaPredicted RBP11.01□□□□□ -0.65
USP11-204ENST00000377107 HMGN3Q15651 99 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 C10orf91Q5T1B1 145 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 FAM185AQ8N0U4 392 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 C15orf54Q8N8G6 183 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 TECTBQ96PL2 329 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 TRIB1Q96RU8 372 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 DECR2Q9NUI1 292 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 WNT9BO14905 357 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 HOXC12P31275 282 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 UCP3P55916 312 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 Q6ZRM9 215 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 MRPL30Q8TCC3 161 aaKnown RBP11.01□□□□□ -0.65
USP11-204ENST00000377107 RAB39BQ96DA2 213 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 LYRM2Q9NU23 88 aaPredicted RBP11.01□□□□□ -0.65
USP11-204ENST00000377107 IL36GQ9NZH8 169 aa11.01□□□□□ -0.65
USP11-204ENST00000377107 PIEZO2Q9H5I5 2752 aa11□□□□□ -0.65
USP11-204ENST00000377107 TRGV5A0A0B4J1U4 118 aa11□□□□□ -0.65
USP11-204ENST00000377107 YIF1AO95070 293 aa11□□□□□ -0.65
USP11-204ENST00000377107 SP1P08047 785 aa11□□□□□ -0.65
USP11-204ENST00000377107 RAB5CP51148 216 aa11□□□□□ -0.65
USP11-204ENST00000377107 LINC00205P59089 165 aa11□□□□□ -0.65
USP11-204ENST00000377107 SSX9Q7RTT3 188 aa11□□□□□ -0.65
USP11-204ENST00000377107 ZNF561Q8N587 486 aa11□□□□□ -0.65
USP11-204ENST00000377107 NIPSNAP3BQ9BS92 247 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms