RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 OPN3Q9H1Y3 402 aaPredicted RBP15.84■□□□□ 0.13
USP49-202ENST00000373010 CACNA1GO43497 2377 aa15.83■□□□□ 0.13
USP49-202ENST00000373010 DUXBA0A1W2PPF3 345 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 C9JQL5 133 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 CNOT4O95628 575 aaKnown RBP15.83■□□□□ 0.12
USP49-202ENST00000373010 TMEM50AO95807 157 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 CECR9P0C854 216 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 PVALBP20472 110 aaPredicted RBP15.83■□□□□ 0.12
USP49-202ENST00000373010 EPHA1P21709 976 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 ZNF610Q8N9Z0 462 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 TREM2Q9NZC2 230 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 PURGQ9UJV8 347 aaKnown RBP15.83■□□□□ 0.12
USP49-202ENST00000373010 RFNGQ9Y644 331 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 MED19A0JLT2 244 aaPredicted RBP15.83■□□□□ 0.12
USP49-202ENST00000373010 CLEC18AA5D8T8 446 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 PROB1E7EW31 1015 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 HSPA12AO43301 675 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 IGLV2-14P01704 120 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 DANCRP0C864 163 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 HOXB1P14653 301 aaPredicted RBP15.83■□□□□ 0.12
USP49-202ENST00000373010 S100GP29377 79 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 CD80P33681 288 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 TMEM88Q6PEY1 159 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 MOB1BQ7L9L4 216 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 CLEC18CQ8NCF0 446 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 TAAR3PQ9P1P4 343 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 DKK4Q9UBT3 224 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 PPP1R3CQ9UQK1 317 aa15.83■□□□□ 0.12
USP49-202ENST00000373010 NPIPB11E5RHQ5 1161 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 HAND1O96004 215 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 TFF1P04155 84 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 VAMP2P63027 116 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 ID3Q02535 119 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 ZNF616Q08AN1 781 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 IZUMO4Q1ZYL8 232 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 ODF3L1Q8IXM7 274 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 C11orf53Q8IXP5 236 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 OR8G5Q8NG78 346 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 SEC11CQ9BY50 192 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 LYRM2Q9NU23 88 aaPredicted RBP15.82■□□□□ 0.12
USP49-202ENST00000373010 TMEM210A6NLX4 147 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 PSPNO60542 156 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 CD5P06127 495 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 FABP6P51161 128 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 TMEM252Q8N6L7 170 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 C1orf162Q8NEQ5 155 aaPredicted RBP15.82■□□□□ 0.12
USP49-202ENST00000373010 LYPD6BQ8NI32 183 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 IL22RA2Q969J5 263 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 GPR146Q96CH1 333 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 PLSCR4Q9NRQ2 329 aa15.82■□□□□ 0.12
USP49-202ENST00000373010 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.81■□□□□ 0.12
USP49-202ENST00000373010 TNFSF13O75888 250 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 SERPINE2P07093 398 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 SFTA3P0C7M3 94 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 NPBWR1P48145 328 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 MIDNQ504T8 468 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 PRAMEF6Q5VXH4 476 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 SHEQ5VZ18 495 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 Q6ZR03 302 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 SPAG16Q8N0X2 631 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 PLEKHF2Q9H8W4 249 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 CACFD1Q9UGQ2 172 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 KCNS2Q9ULS6 477 aa15.81■□□□□ 0.12
USP49-202ENST00000373010 RBM7Q9Y580 266 aaKnown RBP15.81■□□□□ 0.12
USP49-202ENST00000373010 CHST1O43916 411 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 CST7O76096 145 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 TSPAN15O95858 294 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 CAMLGP49069 296 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 TMEM171Q8WVE6 324 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 STARD4Q96DR4 205 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 HES4Q9HCC6 221 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 MSL2Q9HCI7 577 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 UFSP2Q9NUQ7 469 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 HEATR1Q9H583 2144 aaKnown RBP15.8■□□□□ 0.12
USP49-202ENST00000373010 A6NLC8 198 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 ZNF891A8MT65 544 aaPredicted RBP15.8■□□□□ 0.12
USP49-202ENST00000373010 TIMM8AO60220 97 aaPredicted RBP15.8■□□□□ 0.12
USP49-202ENST00000373010 CEACAM4O75871 244 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 CEACAM6P40199 344 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 IGF2-ASQ6U949 168 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 TMEM182Q6ZP80 229 aaPredicted RBP15.8■□□□□ 0.12
USP49-202ENST00000373010 CBLN2Q8IUK8 224 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 ABHD14BQ96IU4 210 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 MBNL3Q9NUK0 354 aaKnown RBP15.8■□□□□ 0.12
USP49-202ENST00000373010 WIPI2Q9Y4P8 454 aa15.8■□□□□ 0.12
USP49-202ENST00000373010 AHRRA9YTQ3 701 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 IGKV1-39P01597 117 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 PRH1P02810 166 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 IGKV1D-39P04432 117 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 HMGN3Q15651 99 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 SEM1Q6ZVN7 128 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 LUZP4Q9P127 313 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 PROCRQ9UNN8 238 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 ZNF292O60281 2723 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.79■□□□□ 0.12
USP49-202ENST00000373010 WRBO00258 174 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 PITX3O75364 302 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 ZNF16P17020 682 aaPredicted RBP15.79■□□□□ 0.12
USP49-202ENST00000373010 ZADH2Q8N4Q0 377 aa15.79■□□□□ 0.12
USP49-202ENST00000373010 TMEM217Q8N7C4 229 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms