RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PSMB11A5LHX3 300 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 CRTAPO75718 401 aaPredicted RBP15.02■□□□□ -0
TMEM53-201ENST00000372235 IGKV1D-33P01593 117 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 IGKV1-33P01594 117 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 IGHV3-7P01780 117 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 SLC35A2P78381 396 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 SYT6Q5T7P8 510 aaPredicted RBP15.02■□□□□ -0
TMEM53-201ENST00000372235 GLT8D1Q68CQ7 371 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 MOB3BQ86TA1 216 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 IZUMO1Q8IYV9 350 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 GAPTQ8N292 157 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 C5orf56Q8N8D9 126 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 OR8H1Q8NGG4 311 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 OR2T10Q8NGZ9 312 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 CCDC107Q8WV48 283 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 PHYHIPQ92561 330 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 GPR61Q9BZJ8 451 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 NECAP2Q9NVZ3 263 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 GNG12Q9UBI6 72 aa15.02■□□□□ -0
TMEM53-201ENST00000372235 IGHV1-3A0A0C4DH29 117 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 A0A1W2PP11 408 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 MAGEA13PA6NCF6 341 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 SC5DO75845 299 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 CDK1P06493 297 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 CD1BP29016 333 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 LOXL3P58215 753 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 SGCDQ92629 289 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 ZFP57Q9NU63 452 aa15.01□□□□□ -0.01
TMEM53-201ENST00000372235 VWFP04275 2813 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 TRAV39A0A0B4J263 110 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 A0A1W2PRX2 142 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 H0YHG0 523 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 SPHARQ15513 63 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 ACSM3Q53FZ2 586 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 FBLN7Q53RD9 439 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 KHDC1LQ5JSQ8 128 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 UTF1Q5T230 341 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 LAIR2Q6ISS4 152 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 SLC35E3Q7Z769 313 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 TGIF2LXQ8IUE1 241 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 RCC1LQ96I51 464 aaKnown RBP15□□□□□ -0.01
TMEM53-201ENST00000372235 Q96M66 194 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 LIN7CQ9NUP9 197 aaKnown RBP15□□□□□ -0.01
TMEM53-201ENST00000372235 TPRKBQ9Y3C4 175 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 CMYA5Q8N3K9 4069 aa15□□□□□ -0.01
TMEM53-201ENST00000372235 PLXNB1O43157 2135 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 SERPINE3A8MV23 424 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 C12orf77C9JDV5 145 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 PDCD6O75340 191 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 RGS11O94810 467 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 MOSP00540 346 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 IGHG2P01859 326 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 ZNF137PP52743 207 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 GABPB1Q06547 395 aaPredicted RBP14.99□□□□□ -0.01
TMEM53-201ENST00000372235 HNF4GQ14541 408 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 C6orf141Q5SZD1 244 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 HIST2H2BDQ6DRA6 164 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 SLC25A48Q6ZT89 311 aaKnown RBP14.99□□□□□ -0.01
TMEM53-201ENST00000372235 LYPD6Q86Y78 171 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 RTN4IP1Q8WWV3 396 aaPredicted RBP14.99□□□□□ -0.01
TMEM53-201ENST00000372235 NEDD4LQ96PU5 975 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 VCX3BQ9H321 246 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 BANF2Q9H503 90 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 ZNF581Q9P0T4 197 aa14.99□□□□□ -0.01
TMEM53-201ENST00000372235 A0A1W2PPE3 182 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 NCBP2LA6PVI3 153 aaKnown RBP14.98□□□□□ -0.01
TMEM53-201ENST00000372235 PTGES3LE9PB15 166 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 PIN1P1O15428 100 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 TRAM1Q15629 374 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 OXLD1Q5BKU9 147 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 TCTEX1D4Q5JR98 221 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 UNQ9370/PRO34162Q6UXP9 181 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 OR4K15Q8NH41 348 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 KCNG3Q8TAE7 436 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 ST6GALNAC6Q969X2 333 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 EAF1Q96JC9 268 aaPredicted RBP14.98□□□□□ -0.01
TMEM53-201ENST00000372235 RASL11BQ9BPW5 248 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 OR2S2Q9NQN1 319 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 MBNL3Q9NUK0 354 aaKnown RBP14.98□□□□□ -0.01
TMEM53-201ENST00000372235 JPT1Q9UK76 154 aa14.98□□□□□ -0.01
TMEM53-201ENST00000372235 ERICH4A6NGS2 130 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 AP4M1O00189 453 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 RRP9O43818 475 aaKnown RBP14.97□□□□□ -0.01
TMEM53-201ENST00000372235 BPNT1O95861 308 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 HBZP02008 142 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 PSMA1P25786 263 aaKnown RBP14.97□□□□□ -0.01
TMEM53-201ENST00000372235 HTD2P86397 168 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 DIAPH2-AS1Q14236 149 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 MED22Q15528 200 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 HSD17B12Q53GQ0 312 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 PRR18Q8N4B5 295 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 TMEM104Q8NE00 496 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 UFD1Q92890 307 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 PHF21AQ96BD5 680 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 GALMQ96C23 342 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 ABRACLQ9P1F3 81 aa14.97□□□□□ -0.01
TMEM53-201ENST00000372235 ZMAT5Q9UDW3 170 aaKnown RBP14.97□□□□□ -0.01
TMEM53-201ENST00000372235 IGHV3-43A0A0B4J1X8 118 aa14.96□□□□□ -0.01
TMEM53-201ENST00000372235 SH2D7A6NKC9 451 aaPredicted RBP14.96□□□□□ -0.01
TMEM53-201ENST00000372235 IGHV3-43DP0DP04 118 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms