RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 F2RP25116 425 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 ID4P47928 161 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 TMEM33P57088 247 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 GNMTQ14749 295 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 CLEC18CQ8NCF0 446 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 MARC2Q969Z3 335 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 TAF9BQ9HBM6 251 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 OR1A1Q9P1Q5 309 aa14.08□□□□□ -0.16
SAMM50-201ENST00000350028 RCL1Q9Y2P8 373 aaKnown RBP14.08□□□□□ -0.16
SAMM50-201ENST00000350028 TRAV39A0A0B4J263 110 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 NUDT19A8MXV4 375 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 M0R1B8 84 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 LGALS8O00214 317 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 WNT9BO14905 357 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 HSPA12AO43301 675 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 CRYAAP02489 173 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 HEXAP06865 529 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 IGF2RP11717 2491 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 DMBX1Q8NFW5 382 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 ABHD17AQ96GS6 310 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 RAB19A4D1S5 217 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 PSPNO60542 156 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 GLRXP35754 106 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 CD200P41217 278 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
SAMM50-201ENST00000350028 TESK1Q15569 626 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 SMIM21Q3B7S5 101 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 UQCC3Q6UW78 93 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 OR1S2Q8NGQ3 325 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 SAT2Q96F10 170 aaPredicted RBP14.07□□□□□ -0.16
SAMM50-201ENST00000350028 NARFLQ9H6Q4 476 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 UFSP2Q9NUQ7 469 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 ASF1BQ9NVP2 202 aa14.07□□□□□ -0.16
SAMM50-201ENST00000350028 IGHV3-13P01766 116 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 PVALBP20472 110 aaPredicted RBP14.06□□□□□ -0.16
SAMM50-201ENST00000350028 CEBPDP49716 269 aaPredicted RBP14.06□□□□□ -0.16
SAMM50-201ENST00000350028 NMSQ5H8A3 153 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 STPG2Q8N412 459 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 UBAC2Q8NBM4 344 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 OR10Z1Q8NGY1 313 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 C11orf1Q9H5F2 150 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 CHD8Q9HCK8 2581 aa14.06□□□□□ -0.16
SAMM50-201ENST00000350028 BORCS7-ASMTA0A0B4J1R7 106 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 OOEPA6NGQ2 149 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 A8MXE2 369 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 ADAM20O43506 726 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 TNFSF12O43508 249 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 PTBP3O95758 552 aaKnown RBP14.05□□□□□ -0.16
SAMM50-201ENST00000350028 M6PRP20645 277 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 TUSC1Q2TAM9 212 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 PRR18Q8N4B5 295 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 OR2Z1Q8NG97 314 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 ARL11Q969Q4 196 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 GPHA2Q96T91 129 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 ARV1Q9H2C2 271 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 SEBOXQ9HB31 216 aaPredicted RBP14.05□□□□□ -0.16
SAMM50-201ENST00000350028 ZDHHC8Q9ULC8 765 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 TP53TG5Q9Y2B4 290 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 RBM7Q9Y580 266 aaKnown RBP14.05□□□□□ -0.16
SAMM50-201ENST00000350028 ACACAQ13085 2346 aa14.05□□□□□ -0.16
SAMM50-201ENST00000350028 PRRG2O14669 202 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 SERPINE2P07093 398 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 SLC25A6P12236 298 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 MMP9P14780 707 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 CEACAM6P40199 344 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 NKX6-1P78426 367 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-201ENST00000350028 LRRC29Q8WV35 223 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 ERGIC1Q969X5 290 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 GALMQ96C23 342 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 LPAR3Q9UBY5 353 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 DUSP13Q9UII6 198 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 ZNF705EA8MWA4 302 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-201ENST00000350028 CFHR2P36980 270 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 SULT1A2P50226 295 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 KLF3P57682 345 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-201ENST00000350028 ID3Q02535 119 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 MSMPQ1L6U9 139 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 ALKBH2Q6NS38 261 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 FAM90A1Q86YD7 464 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 SPACA3Q8IXA5 215 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 SMIM3Q9BZL3 60 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 TOLLIPQ9H0E2 274 aa14.04□□□□□ -0.16
SAMM50-201ENST00000350028 ANKRD11Q6UB99 2663 aaPredicted RBP14.04□□□□□ -0.16
SAMM50-201ENST00000350028 HEATR1Q9H583 2144 aaKnown RBP14.03□□□□□ -0.16
SAMM50-201ENST00000350028 IGLV2-14P01704 120 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 OR3A1P47881 315 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 TDGF1P3P51864 188 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 RPS23P62266 143 aaKnown RBP14.03□□□□□ -0.16
SAMM50-201ENST00000350028 BLOC1S1P78537 153 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 COL10A1Q03692 680 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 LRP11Q86VZ4 500 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 DOLPP1Q86YN1 238 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 OR2C3Q8N628 320 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 ZBTB34Q8NCN2 500 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 OR51H1Q8NH63 302 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 COQ2Q96H96 371 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 SMIM8Q96KF7 97 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 PLEKHF2Q9H8W4 249 aa14.03□□□□□ -0.16
SAMM50-201ENST00000350028 ATMQ13315 3056 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms