RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ZNF554Q86TJ5 538 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 TPRA1Q86W33 373 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 DYNAPQ8N1N2 210 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 GAPTQ8N292 157 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 PRR18Q8N4B5 295 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 OR4C13Q8NGP0 309 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 RPEQ96AT9 228 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 CHCHD6Q9BRQ6 235 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 LPAR5Q9H1C0 372 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 GNG12Q9UBI6 72 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 RAB22AQ9UL26 194 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 MMP24Q9Y5R2 645 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 C12orf77C9JDV5 145 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 MDKP21741 143 aaPredicted RBP15.5■□□□□ 0.07
SYNE4-202ENST00000340477 IL3RAP26951 378 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 CFPP27918 469 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 MADCAM1Q13477 382 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 MOB1BQ7L9L4 216 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 TOMM40LQ969M1 308 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 SULT4A1Q9BR01 284 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 FAAP24Q9BTP7 215 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 NPFFR1Q9GZQ6 430 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 RIMS4Q9H426 269 aaPredicted RBP15.5■□□□□ 0.07
SYNE4-202ENST00000340477 LIN7BQ9HAP6 207 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 ABRACLQ9P1F3 81 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 PSG11Q9UQ72 335 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 TCF19Q9Y242 345 aa15.5■□□□□ 0.07
SYNE4-202ENST00000340477 TMEM272A0A1B0GTI8 110 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 NOTOA8MTQ0 251 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 C15orf65H3BRN8 121 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 IGHV3-7P01780 117 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 GADD45AP24522 165 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 VEGFCP49767 419 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 MRPS15P82914 257 aaKnown RBP15.49■□□□□ 0.07
SYNE4-202ENST00000340477 Q3ZCU0 254 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 LDLRAD2Q5SZI1 272 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 TPTE2P1Q5T6R2 138 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 OLFML2AQ68BL7 652 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 UBALD1Q8TB05 177 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 MRPL30Q8TCC3 161 aaKnown RBP15.49■□□□□ 0.07
SYNE4-202ENST00000340477 CAPSLQ8WWF8 208 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 LEAP2Q969E1 77 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 OR51E2Q9H255 320 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 ZNF696Q9H7X3 374 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 GFOD1Q9NXC2 390 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 HSF4Q9ULV5 492 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 ANK2Q01484 3957 aa15.49■□□□□ 0.07
SYNE4-202ENST00000340477 DNHD1Q96M86 4753 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 SHISA3A0PJX4 238 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 CLPSL1A2RUU4 121 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 METTL21EPA6NDL7 271 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 HBZP02008 142 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 RCC1P18754 421 aaPredicted RBP15.48■□□□□ 0.07
SYNE4-202ENST00000340477 RAB6AP20340 208 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 FAM89BQ8N5H3 189 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 SETD6Q8TBK2 473 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 TAF15Q92804 592 aaKnown RBP eCLIP15.48■□□□□ 0.07
SYNE4-202ENST00000340477 ZNF747Q9BV97 191 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 RANBP3Q9H6Z4 567 aaPredicted RBP15.48■□□□□ 0.07
SYNE4-202ENST00000340477 TAF9BQ9HBM6 251 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 MBNL3Q9NUK0 354 aaKnown RBP15.48■□□□□ 0.07
SYNE4-202ENST00000340477 MGAT4AQ9UM21 535 aa15.48■□□□□ 0.07
SYNE4-202ENST00000340477 A0A0A6YYD4 124 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 IGHV3-43A0A0B4J1X8 118 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 SOCS1O15524 211 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 LPLP06858 475 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 IGHV3-43DP0DP04 118 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 RAB7AP51149 207 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 RAB13P51153 203 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 RELBQ01201 579 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 SHISA2Q6UWI4 295 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 Q6ZSV7 163 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 Q6ZTK2 550 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 C8orf31Q8N9H6 132 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 AKR1E2Q96JD6 320 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 C12orf4Q9NQ89 552 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 RNF114Q9Y508 228 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 TENM1Q9UKZ4 2725 aa15.47■□□□□ 0.07
SYNE4-202ENST00000340477 SMIM30A4D0T7 59 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 LDLRAD4O15165 306 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 RGS11O94810 467 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 OR1L1Q8NH94 360 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 PIFOQ8TCI5 191 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 PTX4Q96A99 478 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 GALMQ96C23 342 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 ARHGAP5-AS1Q96IT6 56 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 C16orf95Q9H693 158 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 OR2S2Q9NQN1 319 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 AK3Q9UIJ7 227 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 JPT1Q9UK76 154 aa15.46■□□□□ 0.07
SYNE4-202ENST00000340477 A6NDX4 124 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 TSPAN9O75954 239 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 SDC2P34741 201 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 LOXL3P58215 753 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 ARSJQ5FYB0 599 aaPredicted RBP15.45■□□□□ 0.06
SYNE4-202ENST00000340477 SFXN4Q6P4A7 337 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 C16orf82Q7Z2V1 217 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 TMEM219Q86XT9 240 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 LINC00311Q8N616 119 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 OR10V1Q8NGI7 309 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms