RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SLIRPQ9GZT3 109 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 TBL2Q9Y4P3 447 aaKnown RBP14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 IGHV2-26A0A0B4J1V2 119 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 RGS5O15539 181 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 RGS11O94810 467 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 RCC1P18754 421 aaPredicted RBP14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 PRRX1P54821 245 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF626Q68DY1 528 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF782Q6ZMW2 699 aaPredicted RBP14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 IL17RELQ6ZVW7 336 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 C8orf31Q8N9H6 132 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 BEND2Q8NDZ0 799 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 SETD6Q8TBK2 473 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 SUCNR1Q9BXA5 334 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 NXF2Q9GZY0 626 aaKnown RBP14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 MMP27Q9H306 513 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 AUNIPQ9H7T9 357 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 Q9N2K0 584 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 JPT1Q9UK76 154 aa14.62□□□□□ -0.07
SSSCA1-201ENST00000309328 FN1P02751 2386 aaKnown RBP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 A0A0A6YYJ9 748 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 MEX3AA1L020 520 aaKnown RBP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 TMEM235A6NFC5 223 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 FAM25AB3EWG3 89 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 FAM25CB3EWG5 89 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 FAM25GB3EWG6 89 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 TOR1AO14656 332 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 NPFFO15130 113 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 HPGDSO60760 199 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 HBZP02008 142 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 FCGR3AP08637 254 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 HLA-DRB3P79483 266 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 LY6G6FQ5SQ64 297 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 MINOS1Q5TGZ0 78 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 RBMS3Q6XE24 437 aaKnown RBP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 ABHD12Q8N2K0 398 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 PNKDQ8N490 385 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 OR9G1Q8NH87 305 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 MCFD2Q8NI22 146 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF418Q8TF45 676 aaPredicted RBP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 ZMAT3Q9HA38 289 aaKnown RBP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 AMMECR1Q9Y4X0 333 aaPredicted RBP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 MINOS1-NBL1R4GNA1 71 aa14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 NIPBLQ6KC79 2804 aaeCLIP14.61□□□□□ -0.07
SSSCA1-201ENST00000309328 ODF3BA8MYP8 253 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 TRDCB7Z8K6 153 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 SDCBPO00560 298 aaPredicted RBP14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 EIF4EP06730 217 aaKnown RBP14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 FBP1P09467 338 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 ELK1P19419 428 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 OMGP23515 440 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 COX7A1P24310 79 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 NFYBP25208 207 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 TAS2R20P59543 309 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 HCP5Q6MZN7 132 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 OR4A4PQ8NGN8 299 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 RFESDQ8TAC1 157 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 FAM216AQ8WUB2 273 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 JMJD8Q96S16 334 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 C6orf62Q9GZU0 229 aaPredicted RBP14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 SCPEP1Q9HB40 452 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF286AQ9HBT8 521 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 GFOD1Q9NXC2 390 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 GNG12Q9UBI6 72 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 FAM96BQ9Y3D0 163 aa14.6□□□□□ -0.07
SSSCA1-201ENST00000309328 TRAV39A0A0B4J263 110 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 SULT1C2O00338 296 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 ARG1P05089 322 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 CTXN2P0C2S0 81 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 CEACAM3P40198 252 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 ARHGDIBP52566 201 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 OLFML2AQ68BL7 652 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 PRR18Q8N4B5 295 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 OCSTAMPQ9BR26 566 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 HDHD3Q9BSH5 251 aaPredicted RBP14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 DCUN1D5Q9BTE7 237 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 OR2S2Q9NQN1 319 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF69Q9UC07 566 aa14.59□□□□□ -0.07
SSSCA1-201ENST00000309328 MEIOCA2RUB1 952 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 FABP7O15540 132 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 YPEL1O60688 119 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 MMP23AO75900 390 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 ZBTB25P24278 435 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 S100A5P33763 92 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 PRSS3P35030 304 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 SAA4P35542 130 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 LOXL3P58215 753 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 MRPS10P82664 201 aaKnown RBP14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 KLRD1Q13241 179 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 TUSC1Q2TAM9 212 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 BRD3OSQ6XYD6 125 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 LINC00311Q8N616 119 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 OR1L1Q8NH94 360 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 MALSU1Q96EH3 234 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 YPEL2Q96QA6 119 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 MMP28Q9H239 520 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 GHITMQ9H3K2 345 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 PRDM13Q9H4Q3 707 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 EXTL2Q9UBQ6 330 aa14.58□□□□□ -0.08
SSSCA1-201ENST00000309328 MXRA5Q9NR99 2828 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms