RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 BIDP55957 195 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 FAM78BQ5VT40 261 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 OR51T1Q8NGJ9 327 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 CORO2AQ92828 525 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 FBLN5Q9UBX5 448 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 GDF9O60383 454 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 IGLC2P0DOY2 106 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 IGLC3P0DOY3 106 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 BLVRBP30043 206 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 OR1D5P58170 312 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 ACKR1Q16570 336 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 EMC4Q5J8M3 183 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 LIAT1Q6ZQX7 453 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 OR5AS1Q8N127 324 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 GPR146Q96CH1 333 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 BTF3L4Q96K17 158 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 SHANK1Q9Y566 2161 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 VSTM2BA6NLU5 285 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 MMP23AO75900 390 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 CLPSP04118 112 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 MTCP1P56278 107 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 FOXL2P58012 376 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 CD226Q15762 336 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 FFAR4Q5NUL3 377 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 GNPNAT1Q96EK6 184 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 PXMP4Q9Y6I8 212 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 ARHGAP21Q5T5U3 1957 aa13.54□□□□□ -0.24
CTDSP1-201ENST00000273062 TRAV1-1A0A0B4J248 108 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 A0A0U1RQK1 487 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 RRADP55042 308 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 FMODQ06828 376 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 SHBQ15464 509 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 FAM57BQ71RH2 274 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 C6orf201Q7Z4U5 140 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 BCORP1Q8N888 145 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 FAM103A1Q9BTL3 118 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 IL19Q9UHD0 177 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 SEC16AO15027 2179 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 WDR87Q6ZQQ6 2873 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 SLC6A8P48029 635 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 IGLV3-21P80748 117 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 VAMP3Q15836 100 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 ATP5SQ99766 215 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 PECRQ9BY49 303 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 OR10A2Q9H208 303 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 LYRM2Q9NU23 88 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 HSPB7Q9UBY9 170 aa13.53□□□□□ -0.24
CTDSP1-201ENST00000273062 LILRA5A6NI73 299 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 PHF1O43189 567 aaPredicted RBP13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 TPPP2P59282 170 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 TAS2R30P59541 319 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 KRTDAPP60985 99 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 ABCA11PQ4W5N1 156 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 ZNF440Q8IYI8 595 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 OR51E1Q8TCB6 317 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 LIPHQ8WWY8 451 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 HIPK2Q9H2X6 1198 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 SLC2A9Q9NRM0 540 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 PNO1Q9NRX1 252 aaKnown RBP13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 UQCR10Q9UDW1 63 aa13.52□□□□□ -0.24
CTDSP1-201ENST00000273062 FRYLO94915 3013 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 CABIN1Q9Y6J0 2220 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 H3BP45 60 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 HMGB3O15347 200 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 KBTBD11O94819 623 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 SYNGR4O95473 234 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 NXPH1P58417 271 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 CFHR1Q03591 330 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 ZNF141Q15928 474 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 MORN2Q502X0 79 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 TMEM108Q6UXF1 575 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 OR5D14Q8NGL3 314 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 SH3BGRL2Q9UJC5 107 aa13.52□□□□□ -0.25
CTDSP1-201ENST00000273062 A0A1W2PR80 420 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 EPHA8P29322 1005 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 OPRM1P35372 400 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 C17orf82Q86X59 251 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 RTN4RQ9BZR6 473 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 PARLQ9H300 379 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 FAM206AQ9NX38 181 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 TP73-AS1Q9UF72 201 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 ODAMA1E959 279 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 LMO7DNF2Z398 122 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 WNT2P09544 360 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 NBEAP1P0C6P0 100 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 AADACP22760 399 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 DTYMKP23919 212 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 CDC34P49427 236 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 FUT7Q11130 342 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 ST6GALNAC3Q8NDV1 305 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 OR5AU1Q8NGC0 362 aa13.51□□□□□ -0.25
CTDSP1-201ENST00000273062 GATAD1Q8WUU5 269 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms