RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 OR51B2Q9Y5P1 312 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 RBBP6Q7Z6E9 1792 aaKnown RBP9.38□□□□□ -0.91
CPT1A-201ENST00000265641 DRD1P21728 446 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 GUCD1Q96NT3 240 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 RNF186Q9NXI6 227 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 ZNF217O75362 1048 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 OR4S2Q8NH73 311 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 PRR13Q9NZ81 148 aa9.38□□□□□ -0.91
CPT1A-201ENST00000265641 ERRFI1Q9UJM3 462 aaPredicted RBP9.38□□□□□ -0.91
CPT1A-201ENST00000265641 NKX6-3A6NJ46 265 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 HOXC4P09017 264 aaPredicted RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 SRSF4Q08170 494 aaKnown RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 ZIC1Q15915 447 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 DEFB133Q30KQ1 61 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 GBGT1Q8N5D6 347 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 BHLHE23Q8NDY6 225 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 RDH5Q92781 318 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 TMEM56Q96MV1 263 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 LRRC3CA6NJW4 275 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 AMBPP02760 352 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 GCSHP23434 173 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 FBXO46Q6PJ61 603 aaPredicted RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 OR4C3Q8NH37 302 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 CA3P07451 260 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 UQCRFS1P47985 274 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 NANOS3P60323 173 aaKnown RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 ROM1Q03395 351 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 ZNF816Q0VGE8 651 aaPredicted RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 SMIM21Q3B7S5 101 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 C9orf135Q5VTT2 229 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 UBALD1Q8TB05 177 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 SLC37A2Q8TED4 501 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 TAF15Q92804 592 aaKnown RBP eCLIP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 NEUROG1Q92886 237 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 PERPQ96FX8 193 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 ZPBPQ9BS86 351 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 AAMDCQ9H7C9 122 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 SPRY1O43609 319 aaPredicted RBP9.37□□□□□ -0.91
CPT1A-201ENST00000265641 C1QL1O75973 258 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 NTN1O95631 604 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 FCGR3AP08637 254 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 DEFB103AP81534 67 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 TGIF1Q15583 401 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 ZNF77Q15935 545 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 ZNF766Q5HY98 468 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 CST9Q5W186 159 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 SCGB1D4Q6XE38 83 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 DOLPP1Q86YN1 238 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
CPT1A-201ENST00000265641 UMODP07911 640 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 KIR3DL2P43630 455 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 FAM53BQ14153 422 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 SSX8Q7RTT4 187 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 KMT5CQ86Y97 462 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 PDPNQ86YL7 162 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 CPEB3Q8NE35 698 aaKnown RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 OR1F12Q8NHA8 337 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 CLDND2Q8NHS1 167 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 LPAR2Q9HBW0 351 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 IL23AQ9NPF7 189 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 KLF7O75840 302 aaPredicted RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 CD160O95971 181 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 FAM157CP0CG43 387 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 MFAP2P55001 183 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 OR4X2Q8NGF9 303 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 KCNE4Q8WWG9 221 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 TAAR3PQ9P1P4 343 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 TBL2Q9Y4P3 447 aaKnown RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 SOX21Q9Y651 276 aaPredicted RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 SRSF9Q13242 221 aaKnown RBP eCLIP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 FAM78AQ5JUQ0 283 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 SPSB2Q99619 263 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 ST20Q9HBF5 79 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 MRPS18BQ9Y676 258 aaKnown RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 PTPRFP10586 1907 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 NDUFB4O95168 129 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 SRIP30626 198 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 LTC4SQ16873 150 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 IBA57Q5T440 356 aaKnown RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 OR4F17Q8NGA8 305 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 MBD3L1Q8WWY6 194 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 APOBEC3DQ96AK3 386 aaPredicted RBP9.36□□□□□ -0.91
CPT1A-201ENST00000265641 GRAMD2BQ96HH9 432 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 FAM234AQ9H0X4 552 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 UBTD1Q9HAC8 227 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 HES4Q9HCC6 221 aa9.36□□□□□ -0.91
CPT1A-201ENST00000265641 DTX4Q9Y2E6 619 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms