RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 UBE2L5PA0A1B0GUS4 154 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
VHL-201ENST00000256474 TRGC2P03986 189 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 HEXAP06865 529 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 OR8U8P0C7N1 319 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 S100PP25815 95 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 DUSP3P51452 185 aaPredicted RBP11.54□□□□□ -0.56
VHL-201ENST00000256474 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 NUFIP2Q7Z417 695 aaKnown RBP11.54□□□□□ -0.56
VHL-201ENST00000256474 OR10D4PQ8NGN7 298 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 LILRB1Q8NHL6 650 aaPredicted RBP11.54□□□□□ -0.56
VHL-201ENST00000256474 RFESDQ8TAC1 157 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 RPUSD4Q96CM3 377 aaKnown RBP11.54□□□□□ -0.56
VHL-201ENST00000256474 AP4M1O00189 453 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 CDIPTO14735 213 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 CXCL1P09341 107 aa11.54□□□□□ -0.56
VHL-201ENST00000256474 USF3Q68DE3 2245 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 KIR2DS1A0A191URI9 304 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 PQLC2LA1A4F0 135 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 KIR2DS4P43632 304 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 CLN3Q13286 438 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 KIR2DS1Q14954 304 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 ADIRFQ15847 76 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 PSENENQ9NZ42 101 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 IGHV3-43A0A0B4J1X8 118 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 CA11O75493 328 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 NXPH2O95156 264 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 CDS2O95674 445 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 IGHV3-43DP0DP04 118 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 RAB5CP51148 216 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 LINC00205P59089 165 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 OR1C1Q15619 314 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 BTNL3Q6UXE8 466 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 Q6ZRM9 215 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
VHL-201ENST00000256474 PFDN5Q99471 154 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 LYRM2Q9NU23 88 aaPredicted RBP11.53□□□□□ -0.56
VHL-201ENST00000256474 SVEP1Q4LDE5 3571 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 SRPXP78539 464 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 TLE4Q04727 773 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 FAM58AQ8N1B3 248 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 COL4A2P08572 1712 aa11.53□□□□□ -0.56
VHL-201ENST00000256474 MMP7P09237 267 aaPredicted RBP11.52□□□□□ -0.56
VHL-201ENST00000256474 FGF12P61328 243 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 B2MP61769 119 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 OR8B8Q15620 311 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.56
VHL-201ENST00000256474 Q8WTZ3 238 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 RPRMQ9NS64 109 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 KLF2Q9Y5W3 355 aaPredicted RBP11.52□□□□□ -0.56
VHL-201ENST00000256474 EXPH5Q8NEV8 1989 aa11.52□□□□□ -0.56
VHL-201ENST00000256474 SCAF4O95104 1147 aaKnown RBP11.52□□□□□ -0.57
VHL-201ENST00000256474 F2RP25116 425 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 EIF2S3P41091 472 aaKnown RBP11.52□□□□□ -0.57
VHL-201ENST00000256474 NKX6-1P78426 367 aaPredicted RBP11.52□□□□□ -0.57
VHL-201ENST00000256474 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 LFNGQ8NES3 379 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 CACNA1HO95180 2353 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 KIAA1324LA8MWY0 1029 aaPredicted RBP11.52□□□□□ -0.57
VHL-201ENST00000256474 CELA3BP08861 270 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 CEACAM6P40199 344 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 ERVFRD-1P60508 538 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 ARG2P78540 354 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 APOBEC3DQ96AK3 386 aaPredicted RBP11.52□□□□□ -0.57
VHL-201ENST00000256474 SDSLQ96GA7 329 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 GPR61Q9BZJ8 451 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 PRO1933Q9H354 126 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 SLC25A22Q9H936 323 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 DOK5Q9P104 306 aa11.52□□□□□ -0.57
VHL-201ENST00000256474 PITX3O75364 302 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 LYZL6O75951 148 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 CD200P41217 278 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 ALKBH6Q3KRA9 238 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 TMEM42Q69YG0 159 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 SPNS3Q6ZMD2 512 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 ZNF826PQ6ZT77 177 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 SSX9Q7RTT3 188 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 OR2M7Q8NG81 312 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 TOLLIPQ9H0E2 274 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 MED12LQ86YW9 2145 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 S100A8P05109 93 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
VHL-201ENST00000256474 FABP4P15090 132 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 CEACAM21Q3KPI0 293 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 CNEP1R1Q8N9A8 125 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 CA5BP1Q8WTZ4 195 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 CYTIPO60759 359 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 CD55P08174 381 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 FIP1L1Q6UN15 594 aaKnown RBP11.51□□□□□ -0.57
VHL-201ENST00000256474 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
VHL-201ENST00000256474 TVP23CQ96ET8 276 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms