RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 OR2W1Q9Y3N9 320 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 G3V3Q6 166 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 K7N7A8 449 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 MGST3O14880 152 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 SWI5Q1ZZU3 235 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 TRAT1Q6PIZ9 186 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 FAM185AQ8N0U4 392 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 SECTM1Q8WVN6 248 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 GALNT14Q96FL9 552 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 NAA60Q9H7X0 242 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 KCNIP3Q9Y2W7 256 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 GNRHRP30968 328 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 GLIPR1P48060 266 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 ANKRD55Q3KP44 614 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 PHLDA2Q53GA4 152 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 GALMQ96C23 342 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 SDSLQ96GA7 329 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 PDCD10Q9BUL8 212 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 DNTTIP1Q9H147 329 aa15.16■□□□□ 0.02
VIM-201ENST00000224237 CCSO14618 274 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 HSPA12AO43301 675 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 SRSF4Q08170 494 aaKnown RBP15.15■□□□□ 0.02
VIM-201ENST00000224237 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 LGALSLQ3ZCW2 172 aaPredicted RBP15.15■□□□□ 0.02
VIM-201ENST00000224237 TGIF2LYQ8IUE0 185 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 ZNRF1Q8ND25 227 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 OR5D13Q8NGL4 314 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 LURAP1Q96LR2 239 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 SLC5A7Q9GZV3 580 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 RAB18Q9NP72 206 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 OR1A1Q9P1Q5 309 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 MAB21L2Q9Y586 359 aa15.15■□□□□ 0.02
VIM-201ENST00000224237 HRNRQ86YZ3 2850 aaPredicted RBP15.14■□□□□ 0.01
VIM-201ENST00000224237 IGKV1D-13A0A0B4J2D9 117 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 C12orf77C9JDV5 145 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 GPR31O00270 319 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 IGKV1-13P0DP09 117 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 TPRX1Q8N7U7 411 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 MRGPRDQ8TDS7 321 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 WDR89Q96FK6 387 aaPredicted RBP15.14■□□□□ 0.01
VIM-201ENST00000224237 ZNF665Q9H7R5 613 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 ZNF462Q96JM2 2506 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 FLNCQ14315 2725 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 TRAV38-1A0A0B4J264 116 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 CD8AP01732 235 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 HEXAP06865 529 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 RND3P61587 244 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 SUCNR1Q9BXA5 334 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 TMEM106BQ9NUM4 274 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 DCAF16Q9NXF7 216 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 PRR13Q9NZ81 148 aa15.14■□□□□ 0.01
VIM-201ENST00000224237 ODAMA1E959 279 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 FAM25EA8MYX2 175 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 B8ZZF3 427 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 TMEM178BH3BS89 294 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 C19orf84I3L1E1 186 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 HBZP02008 142 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 IL2RGP31785 369 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 GSG1LQ6UXU4 331 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 ZNF788Q6ZQV5 615 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 ZNF818PQ6ZRF7 136 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 CMTM1Q8IZ96 169 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 DEFB108BQ8NET1 73 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 OR10V1Q8NGI7 309 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 OR13A1Q8NGR1 328 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 UBALD1Q8TB05 177 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 VRK1Q99986 396 aaPredicted RBP15.13■□□□□ 0.01
VIM-201ENST00000224237 FAM234AQ9H0X4 552 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 NCOR1P1Q9H4R4 102 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 RDH8Q9NYR8 311 aa15.13■□□□□ 0.01
VIM-201ENST00000224237 RALYQ9UKM9 306 aaKnown RBP15.13■□□□□ 0.01
VIM-201ENST00000224237 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 LRBAP50851 2863 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 LGALS8O00214 317 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 GYPAP02724 150 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 OR5AC1P0C628 307 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 C4BPBP20851 252 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 LUMP51884 338 aaPredicted RBP15.12■□□□□ 0.01
VIM-201ENST00000224237 P2RX3P56373 397 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 FGL1Q08830 312 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 OR1L1Q8NH94 360 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 CCL17Q92583 94 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 GAFA1Q96PS6 74 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 FBXO9Q9UK97 447 aaPredicted RBP15.12■□□□□ 0.01
VIM-201ENST00000224237 TANC2Q9HCD6 1990 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 DSCAMO60469 2012 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 PPIAL4EA0A075B759 164 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 C5orf51A6NDU8 294 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 NKX6-3A6NJ46 265 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 PPIAL4DF5H284 164 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 MPPED1O15442 326 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 C1QL1O75973 258 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 PPIAL4FP0DN26 164 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 GZMHP20718 246 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 S100GP29377 79 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 CEACAM6P40199 344 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 PPOXP50336 477 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 TMEM187Q14656 261 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 CR1LQ2VPA4 569 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 TEX261Q6UWH6 196 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms