RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PDXPQ96GD0 296 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 TMEM74BQ9NUR3 256 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 A0A087WV62 115 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ANKRD20A5PA0PJZ0 165 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ATP5LO75964 103 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 FOXF1Q12946 379 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 UNC119Q13432 240 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MRPL24Q96A35 216 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 TMEM140Q9NV12 185 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 LOC102724200A0A096LPH7 203 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 LOC107984156A0A0G2JMH3 177 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 RAB29O14966 203 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SAP30O75446 220 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 IGHA1P01876 353 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 IGHA2P01877 340 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SSBP1Q04837 148 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 LBHQ53QV2 105 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 ARL17AQ8IVW1 177 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 OR2K2Q8NGT1 345 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 IL17DQ8TAD2 202 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 TMEM255BQ8WV15 326 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 WBP1LQ9NX94 342 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 C9JCJ5 164 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 PRICKLE4Q2TBC4 344 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 NT5CQ8TCD5 201 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MAP6Q96JE9 813 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 HBZP02008 142 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 PTGER1P34995 402 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 HIST1H1AQ02539 215 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 CTF1Q16619 201 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 FAM74A4Q5TZK3 123 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 VSTM2LQ96N03 204 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 TMEM38AQ9H6F2 299 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 GORASP2Q9H8Y8 452 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MYO18AQ92614 2054 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 SDHDO14521 159 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ANOS1P23352 680 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 P2RY6Q15077 328 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 TMEM241Q24JQ0 296 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CBLL1Q75N03 491 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SLC35E3Q7Z769 313 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CITED2Q99967 270 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 TBC1D29Q9UFV1 150 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CST2P09228 141 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CD99P14209 185 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ZNF324BQ6AW86 544 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 GLIPR2Q9H4G4 154 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 DNAJC15Q9Y5T4 150 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ZNF646O15015 1829 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 A0A1W2PPQ1 181 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 EIF3GO75821 320 aaKnown RBP eCLIP3.03□□□□□ -1.92
NEB-201ENST00000172853 IGKV3-20P01619 116 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CKS1BP61024 79 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 DPTQ07507 201 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 HIST3H3Q16695 136 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ZNF528Q3MIS6 628 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 DHRS4L2Q6PKH6 230 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 GPRIN1Q7Z2K8 1008 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 TMEM45BQ96B21 275 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 RCC1LQ96I51 464 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 TBX15Q96SF7 602 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 JPT2Q9H910 190 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SEMA5BQ9P283 1151 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MAP1BP46821 2468 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 SPINK14Q6IE38 97 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ISCA2Q86U28 154 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 LRP11Q86VZ4 500 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MED29Q9NX70 200 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 FAM221AA4D161 298 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SPINK4O60575 86 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SLC6A1P30531 599 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CD80P33681 288 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 AANATQ16613 207 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 UQCC3Q6UW78 93 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MED20Q9H944 212 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ZMAT3Q9HA38 289 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 TCRBV7S3A2A0A539 114 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CLDN14O95500 239 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 RPL8P62917 257 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 MEF2CQ06413 473 aaPredicted RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 CORO6Q6QEF8 472 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 WDFY2Q96P53 400 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 DDA1Q9BW61 102 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 MSL2Q9HCI7 577 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 G6PC2Q9NQR9 355 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 IL17BQ9UHF5 180 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 TRDCB7Z8K6 153 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CD74P04233 296 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 LINC00869P0C866 280 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 SRD5A1P18405 259 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 DYNLT3P51808 116 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 CLDN12P56749 244 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 PSG5Q15238 335 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 FAM71F2Q6NXP2 309 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 NRAPQ86VF7 1730 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 PDLIM5Q96HC4 596 aaKnown RBP3.03□□□□□ -1.92
NEB-201ENST00000172853 ZMIZ1Q9ULJ6 1067 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 PRSS21Q9Y6M0 314 aa3.03□□□□□ -1.92
NEB-201ENST00000172853 ELOA3CA0A087WX78 387 aaPredicted RBP3.03□□□□□ -1.93
NEB-201ENST00000172853 ZNF32P17041 273 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms