RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 PDCD10Q9BUL8 212 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 NMES1Q9C002 83 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 TOLLIPQ9H0E2 274 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 FXYD6Q9H0Q3 95 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 SLA2Q9H6Q3 261 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 NAA60Q9H7X0 242 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 SAP30LQ9HAJ7 183 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 GCM1Q9NP62 436 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 OR6C3Q9NZP0 311 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 ZNF581Q9P0T4 197 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 LPAR3Q9UBY5 353 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 PAIP2BQ9ULR5 123 aaKnown RBP8.18□□□□□ -1.1
PHGDH-215ENST00000641371 PPP1R3CQ9UQK1 317 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 OR2W1Q9Y3N9 320 aa8.18□□□□□ -1.1
PHGDH-215ENST00000641371 RNF212BA8MTL3 300 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 HSPB6O14558 160 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 SPINT2O43291 252 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 HSPA12AO43301 675 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 AADACP22760 399 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 GABRA2P47869 451 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 PPOXP50336 477 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 PIGPP57054 158 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 COL10A1Q03692 680 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 ZNF672Q499Z4 452 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-215ENST00000641371 KRBOX4Q5JUW0 171 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 PCSK4Q6UW60 755 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 CLEC18BQ6UXF7 455 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 H1FOOQ8IZA3 346 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-215ENST00000641371 LGI3Q8N145 548 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 ASCC1Q8N9N2 400 aaKnown RBP8.17□□□□□ -1.1
PHGDH-215ENST00000641371 ADAD2Q8NCV1 583 aaKnown RBP8.17□□□□□ -1.1
PHGDH-215ENST00000641371 RTN4IP1Q8WWV3 396 aaPredicted RBP8.17□□□□□ -1.1
PHGDH-215ENST00000641371 NINJ1Q92982 152 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 TOMM40LQ969M1 308 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 TMEM230Q96A57 120 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 SDSLQ96GA7 329 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 TMEM204Q9BSN7 226 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 ZNF665Q9H7R5 613 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 SLC2A9Q9NRM0 540 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 COL6A6A6NMZ7 2263 aa8.17□□□□□ -1.1
PHGDH-215ENST00000641371 E7EQL1 145 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 K7N7A8 449 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 LGALS8O00214 317 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 WNT9BO14905 357 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 BET1O15155 118 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 ZNF737O75373 536 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 SCTP09683 121 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 IL2RGP31785 369 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 OR3A1P47881 315 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 LUMP51884 338 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 FXYD4P59646 89 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 HTD2P86397 168 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 TFF3Q07654 80 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 ATXN7L3Q14CW9 347 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 IGFBP7Q16270 282 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 IGSF11Q5DX21 431 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 STUMQ69YW2 141 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 TMEM65Q6PI78 240 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 C17orf107Q6ZR85 190 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 ANKHD1Q8IWZ3 2542 aaKnown RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 DMRTC2Q8IXT2 367 aaPredicted RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 TCTEX1D1Q8N7M0 179 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 OR10V1Q8NGI7 309 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 ANGPTL6Q8NI99 470 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 GRPEL2Q8TAA5 225 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 PLPPR1Q8TBJ4 325 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 CASTOR1Q8WTX7 329 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 EDARADDQ8WWZ3 215 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 IL22RA2Q969J5 263 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 SPIN2AQ99865 258 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 SPIN2BQ9BPZ2 258 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 DIDO1Q9BTC0 2240 aaKnown RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 SLC5A7Q9GZV3 580 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 TAF9BQ9HBM6 251 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 CISD1Q9NZ45 108 aaKnown RBP8.16□□□□□ -1.1
PHGDH-215ENST00000641371 PIPOXQ9P0Z9 390 aa8.16□□□□□ -1.1
PHGDH-215ENST00000641371 DYSFO75923 2080 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 HCFC1P51610 2035 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 TANC2Q9HCD6 1990 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 C5orf51A6NDU8 294 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 ITGB1BP1O14713 200 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 RGS13O14921 159 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 SIGLEC5O15389 551 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 MPPED1O15442 326 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 PSPNO60542 156 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 HEXAP06865 529 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 SLC25A4P12235 298 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 RPS2P15880 293 aaKnown RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 NFYAP23511 347 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 P2RX3P56373 397 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 SUPT4H1P63272 117 aaKnown RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 MRPS11P82912 194 aaKnown RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 BAMBIQ13145 260 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 LY6G6FQ5SQ64 297 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 MUC15Q8N387 334 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 BVESQ8NE79 360 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 LINC01560Q8TB33 94 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms