RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 TNFSF10P50591 281 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 FGF8P55075 233 aaPredicted RBP4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 RHOBP62745 196 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 RAB30Q15771 203 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 OTPQ5XKR4 325 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 ETFRF1Q6IPR1 90 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 SLC25A47Q6Q0C1 308 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 SMIM12Q96EX1 92 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 TMEM56Q96MV1 263 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 TRIB1Q96RU8 372 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 RTL8AQ9BWD3 113 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 FOXQ1Q9C009 403 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 GSX1Q9H4S2 264 aaPredicted RBP4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 TMEM167BQ9NRX6 74 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 TMEM56-RWDD3S4R434 201 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 MYLKQ15746 1914 aa4.38□□□□□ -1.71
HNRNPU-230ENST00000640657 PRR32B1ATL7 298 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 M0R1X1 148 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 WDR1O75083 606 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TNFSF13O75888 250 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 NXPH3O95157 252 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 APOA2P02652 100 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 AMBPP02760 352 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 NTF3P20783 257 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CCL1P22362 96 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CHRNB4P30926 498 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 ARR3P36575 388 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CARD18P57730 90 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 UBE2NP61088 152 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TGFBR3Q03167 851 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 EXT1Q16394 746 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 MYPOPQ86VE0 399 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SAXO1Q8IYX7 474 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OR5AS1Q8N127 324 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 GAPTQ8N292 157 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OR13H1Q8NG92 308 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OR1L6Q8NGR2 347 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SPSB2Q99619 263 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 HSPB9Q9BQS6 159 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SF3B5Q9BWJ5 86 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OR2J1Q9GZK6 312 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PAM16Q9Y3D7 125 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 HCFC2Q9Y5Z7 792 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 FAM221AA4D161 298 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 H3BP45 60 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 LINC01387J3KSC0 135 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SIRPB1O00241 398 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 AQP7O14520 342 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SPINT2O43291 252 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 DNPH1O43598 174 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TSPAN2O60636 221 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 MRPL33O75394 65 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CXorf1O96002 111 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 F2RP25116 425 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CDAP32320 146 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 FHITP49789 147 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PMP22Q01453 160 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 EGR4Q05215 589 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CSRP2Q16527 193 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 C12orf54Q6X4T0 127 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TMPRSS7Q7RTY8 843 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PAQR4Q8N4S7 273 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OR52M1Q8NGK5 317 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 VN1R17PQ8TDU5 208 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TAF15Q92804 592 aaKnown RBP eCLIP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 MRPL38Q96DV4 380 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 RCC1LQ96I51 464 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PARD6GQ9BYG4 376 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 WDR61Q9GZS3 305 aaKnown RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 ZNF665Q9H7R5 613 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OR2W1Q9Y3N9 320 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 IGSF23A1L1A6 192 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PAGE4O60829 102 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 ZNF253O75346 499 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CXCL1P09341 107 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PMCHP20382 165 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SSR4P51571 173 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 ARSJQ5FYB0 599 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TSPO2Q5TGU0 170 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PRR27Q6MZM9 219 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TRAT1Q6PIZ9 186 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SGMS2Q8NHU3 365 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CCL4L1Q8NHW4 92 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SLC35E1Q96K37 410 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PMCHL2Q9BQD1 86 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SLC25A22Q9H936 323 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 OCIAD1Q9NX40 245 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 IL36GQ9NZH8 169 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 PPP1R3CQ9UQK1 317 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 CLDN16Q9Y5I7 305 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SPEGQ15772 3267 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 KIAA1324LA8MWY0 1029 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 TOX3O15405 576 aaPredicted RBP4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 RRADP55042 308 aa4.37□□□□□ -1.71
HNRNPU-230ENST00000640657 SUPT4H1P63272 117 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms