RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 FAM90A12PA8MX19 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A5PA8MXJ8 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A15PP0C7V4 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A13PP0C7W8 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A14PP0C7W9 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A24PP0C7X0 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FSTP19883 344 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 CEACAM3P40198 252 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 YIF1BQ5BJH7 314 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 CENPVQ7Z7K6 275 aaPredicted RBP13□□□□□ -0.33
COLCA2-207ENST00000639470 ZNF329Q86UD4 541 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 LYPD6Q86Y78 171 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 OR4K15Q8NH41 348 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 MYDGFQ969H8 173 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 ARL11Q969Q4 196 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 IFT22Q9H7X7 185 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
COLCA2-207ENST00000639470 CHCHD3Q9NX63 227 aaKnown RBP13□□□□□ -0.33
COLCA2-207ENST00000639470 TMEM30CPA0ZSE6 113 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 EFCAB10A6NFE3 127 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 LINC01548A6NM66 108 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 ZNF736B4DX44 427 aaPredicted RBP12.99□□□□□ -0.33
COLCA2-207ENST00000639470 CASQ2O14958 399 aaPredicted RBP12.99□□□□□ -0.33
COLCA2-207ENST00000639470 GPX5O75715 221 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 MT-ND4P03905 459 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 IGLL1P15814 213 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 MNDAP41218 407 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 PAX5Q02548 391 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 HES1Q14469 280 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 KPRPQ5T749 579 aaPredicted RBP12.99□□□□□ -0.33
COLCA2-207ENST00000639470 SIGIRRQ6IA17 410 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 ZNF497Q6ZNH5 498 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 STX19Q8N4C7 294 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 OR10V1Q8NGI7 309 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 OR1L1Q8NH94 360 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 NRG4Q8WWG1 115 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 FAM46BQ96A09 425 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 NCOR1P1Q9H4R4 102 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 FKBP14Q9NWM8 211 aa12.99□□□□□ -0.33
COLCA2-207ENST00000639470 TCRBV4S1A1TA0A5B7 111 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 UBE2QL1A1L167 161 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 C12orf77C9JDV5 145 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
COLCA2-207ENST00000639470 IGKV1D-33P01593 117 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 IGKV1-33P01594 117 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 GTF2F2P13984 249 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 WNT4P56705 351 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 LOXL3P58215 753 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 MADCAM1Q13477 382 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 AWAT2Q6E213 333 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 OR10K2Q6IF99 312 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 Q6ZPA2 131 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 C16orf82Q7Z2V1 217 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 PRR18Q8N4B5 295 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 NANOGP1Q8N7R0 232 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 OR10X1Q8NGY0 326 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 PHF21AQ96BD5 680 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 S100A13Q99584 98 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 CNOT2Q9NZN8 540 aaKnown RBP12.98□□□□□ -0.33
COLCA2-207ENST00000639470 RCC2Q9P258 522 aaKnown RBP12.98□□□□□ -0.33
COLCA2-207ENST00000639470 MOB4Q9Y3A3 225 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
COLCA2-207ENST00000639470 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 OOSP1A8MZH6 123 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 AIPO00170 330 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 HSD17B6O14756 317 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 MYL12BO14950 172 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 TMEM11P17152 192 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 RCC1P18754 421 aaPredicted RBP12.97□□□□□ -0.33
COLCA2-207ENST00000639470 KCNJ3P48549 501 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 EMX1Q04741 257 aaPredicted RBP12.97□□□□□ -0.33
COLCA2-207ENST00000639470 GNMTQ14749 295 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 MPV17LQ2QL34 196 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 RAB12Q6IQ22 244 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 MOB3BQ86TA1 216 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 C5orf56Q8N8D9 126 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 TFAP2CQ92754 450 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 AKR1E2Q96JD6 320 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 SELENOIQ9C0D9 397 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 PLCXD1Q9NUJ7 323 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 GFOD1Q9NXC2 390 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 CKLFQ9UBR5 152 aa12.97□□□□□ -0.33
COLCA2-207ENST00000639470 AMMECR1Q9Y4X0 333 aaPredicted RBP12.97□□□□□ -0.33
COLCA2-207ENST00000639470 IGHV1-3A0A0C4DH29 117 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 PTGES3LE9PB15 166 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 CCRL2O00421 344 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 CRTAPO75718 401 aaPredicted RBP12.96□□□□□ -0.33
COLCA2-207ENST00000639470 FAM106CPP0CH98 169 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 MGMTP16455 207 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 ZNF134P52741 427 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 AQP4P55087 323 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 GABPB1Q06547 395 aaPredicted RBP12.96□□□□□ -0.33
COLCA2-207ENST00000639470 SYT6Q5T7P8 510 aaPredicted RBP12.96□□□□□ -0.33
COLCA2-207ENST00000639470 OR4F17Q8NGA8 305 aa12.96□□□□□ -0.33
COLCA2-207ENST00000639470 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms