RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OMGP23515 440 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 FUT6P51993 359 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 RND3P61587 244 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 CCL20P78556 96 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 PDCD1Q15116 288 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 TMEM211Q6ICI0 200 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 SUMF1Q8NBK3 374 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 OR8G5Q8NG78 346 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 OR1P1Q8NH06 330 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 TMEM222Q9H0R3 208 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 ASCL3Q9NQ33 180 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 ZNF391Q9UJN7 358 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 A6NNC1 897 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 OR7C1O76099 320 aaPredicted RBP7.5□□□□□ -1.21
VCL-207ENST00000624354 TK1P04183 234 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 FUT3P21217 361 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 MRPS11P82912 194 aaKnown RBP7.5□□□□□ -1.21
VCL-207ENST00000624354 PAX5Q02548 391 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 SPIN3Q5JUX0 258 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 DMRTA1Q5VZB9 504 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 TMEM42Q69YG0 159 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 SLC35E3Q7Z769 313 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 IL36GQ9NZH8 169 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 KIAA1456Q9P272 454 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 MRPS18CQ9Y3D5 142 aaKnown RBP7.5□□□□□ -1.21
VCL-207ENST00000624354 MYO7BQ6PIF6 2116 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 IGSF23A1L1A6 192 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 TNFSF11O14788 317 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 ONECUT2O95948 504 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 CST2P09228 141 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 MMP7P09237 267 aaPredicted RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 CCL3P10147 92 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 LIFP15018 202 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 ZNF32P17041 273 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 EPHA1P21709 976 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 OR3A1P47881 315 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 NOVA1P51513 510 aaKnown RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 HERPUD1Q15011 391 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 IQCJQ1A5X6 159 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 PLCXD3Q63HM9 321 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 TMEM252Q8N6L7 170 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 CYB561D1Q8N8Q1 229 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 LIPGQ9Y5X9 500 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 WSB1Q9Y6I7 421 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 A0A0J9YW62 118 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 B4DEV8 164 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 G3V3Y1 287 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 CLDN34H7C241 214 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 SSSCA1O60232 199 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 ZIC3O60481 467 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 OR4A8P0C604 315 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 MDKP21741 143 aaPredicted RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 RBM11P57052 281 aaKnown RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 RAC1P63000 192 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 HLA-DRB3P79483 266 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 SAPCD1Q5SSQ6 148 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 GUSBP11Q6P575 273 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 SPSB3Q6PJ21 355 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 WDR5BQ86VZ2 330 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 ZNF100Q8IYN0 542 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 OR5C1Q8NGR4 320 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 PIGCQ92535 297 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 GNPNAT1Q96EK6 184 aaPredicted RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 ABHD14AQ9BUJ0 271 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 AKIRIN1Q9H9L7 192 aaPredicted RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 PLSCR2Q9NRY7 297 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 LYRM2Q9NU23 88 aaPredicted RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 TCFL5Q9UL49 500 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 GJE1A6NN92 205 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 CELA2AP08217 269 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 PCOLCEQ15113 449 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 ARSJQ5FYB0 599 aaPredicted RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 TBC1D26Q86UD7 250 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 OR4X1Q8NH49 305 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 TMEM171Q8WVE6 324 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 DNASE2BQ8WZ79 361 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 SF3B5Q9BWJ5 86 aaKnown RBP7.49□□□□□ -1.21
VCL-207ENST00000624354 C11orf1Q9H5F2 150 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 TMEM38BQ9NVV0 291 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 P4HTMQ9NXG6 502 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 RFNGQ9Y644 331 aa7.49□□□□□ -1.21
VCL-207ENST00000624354 ZFHX4Q86UP3 3567 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 ESPL1Q14674 2120 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 MGAQ8IWI9 3026 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 IGHV5-10-1A0A0J9YXX1 117 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 A0A1W2PQM1 296 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 SLC33A1O00400 549 aaPredicted RBP7.48□□□□□ -1.21
VCL-207ENST00000624354 CYC1P08574 325 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 B4GALT1P15291 398 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 GNRHRP30968 328 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 RPL29P47914 159 aaKnown RBP7.48□□□□□ -1.21
VCL-207ENST00000624354 CCL7P80098 99 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 EXT1Q16394 746 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 MRPL14Q6P1L8 145 aaKnown RBP7.48□□□□□ -1.21
VCL-207ENST00000624354 ABHD14BQ96IU4 210 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 TMEM56Q96MV1 263 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 MAGT1Q9H0U3 335 aa7.48□□□□□ -1.21
VCL-207ENST00000624354 SLC7A10Q9NS82 523 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms