RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SCPEP1Q9HB40 452 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 CHMP1AQ9HD42 196 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 TRAPPC2LQ9UL33 140 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 UBE2J1Q9Y385 318 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 SVEP1Q4LDE5 3571 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 IGHV2-70DA0A0C4DH43 119 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 KIR2DS1A0A191URI9 304 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 SULT1C2O00338 296 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 CTDSPLO15194 276 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 LIPFP07098 398 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 FCGR3AP08637 254 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 PPIAL4GP0DN37 164 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 MRPS10P82664 201 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 ZNF273Q14593 569 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 ZNF554Q86TJ5 538 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 OR13A1Q8NGR1 328 aa16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 GCDHQ92947 438 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-221ENST00000622702 SONP18583 2426 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 TRAV20A0A0B4J274 112 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 A0A1W2PQ09 198 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 CGB3P0DN86 165 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 CGB7P0DN87 165 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 RCC1P18754 421 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 GZMHP20718 246 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 GUCA2AQ02747 115 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 SRSF7Q16629 238 aaKnown RBP eCLIP16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 GPX8Q8TED1 209 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 CCDC107Q8WV48 283 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 OCSTAMPQ9BR26 566 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 Q9N2K0 584 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 AKIP1Q9NQ31 210 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 MMP26Q9NRE1 261 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 TAS2R3Q9NYW6 316 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 KCNS2Q9ULS6 477 aa16.33■□□□□ 0.2
PDLIM2-221ENST00000622702 FN1P02751 2386 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 TRAV39A0A0B4J263 110 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 A0A1W2PPH5 198 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 MEIOCA2RUB1 952 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 LPLP06858 475 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 GLP1RP43220 463 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 CBX5P45973 191 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF45Q02386 682 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF79Q15937 498 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 C6orf183Q5T699 404 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 Q6ZS49 121 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 TRAPPC6BQ86SZ2 158 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 MFSD4AQ8N468 514 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 MRGPRDQ8TDS7 321 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 LINC00574Q9H8X3 128 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 OPN4Q9UHM6 478 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 MGAT4AQ9UM21 535 aa16.32■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF729A6NN14 1252 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 GABARAPH6UMI1 98 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 ORC5O43913 435 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF728P0DKX0 622 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 DLX6P56179 175 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 BTNL3Q6UXE8 466 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 KIR3DL3Q8N743 410 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 SMIM4Q8WVI0 70 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 S100ZQ8WXG8 99 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 TMEM186Q96B77 213 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF714Q96N38 554 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 ANAPC10Q9UM13 185 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 INSIG2Q9Y5U4 225 aa16.31■□□□□ 0.2
PDLIM2-221ENST00000622702 KBTBD11-OT1A0A1B0GTJ5 212 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 MEX3AA1L020 520 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 CCL3L1P16619 93 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 GATA3P23771 443 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 DVL1P1P54792 670 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 GLCCI1Q86VQ1 547 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 SETD6Q8TBK2 473 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 GAL3ST2Q9H3Q3 398 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 HIF1ANQ9NWT6 349 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 KCNIP1Q9NZI2 227 aa16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 ZNF230Q9UIE0 474 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-221ENST00000622702 C12orf77C9JDV5 145 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 C15orf65H3BRN8 121 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 M0R1W7 72 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 GSTZ1O43708 216 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 RBP4P02753 201 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 HMGN3Q15651 99 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 C17orf58Q2M2W7 97 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 C1orf122Q6ZSJ8 110 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 HOGA1Q86XE5 327 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 C11orf42Q8N5U0 333 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 OR52I2Q8NH67 350 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 FCAMRQ8WWV6 532 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 SRRQ9GZT4 340 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 TAF9BQ9HBM6 251 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 CALYQ9NYX4 217 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 KPTNQ9Y664 436 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 C17orf98A8MV24 154 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 NPIPB11E5RHQ5 1161 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 SSTR5P35346 364 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 KIR2DS4P43632 304 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 DGCR2P98153 550 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 PAX8Q06710 450 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 LSAMPQ13449 338 aa16.29■□□□□ 0.2
PDLIM2-221ENST00000622702 KIR2DS1Q14954 304 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms