RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 DTD1Q8TEA8 209 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 BLNKQ8WV28 456 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 TMEM230Q96A57 120 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 TTTY12Q9BZ98 90 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 H3BQ15 152 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 ID4P47928 161 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 ZP1P60852 638 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 HIST1H3AP68431 136 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 FOXO1Q12778 655 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 A0A0U1RQV5 110 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 RBP4P02753 201 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 NUFIP2Q7Z417 695 aaKnown RBP14.04□□□□□ -0.16
GABRB3-215ENST00000622697 MOGAT3Q86VF5 341 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 PARP11Q9NR21 331 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 LRRC37A2A6NM11 1700 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 KIAA1324LA8MWY0 1029 aaPredicted RBP14.04□□□□□ -0.16
GABRB3-215ENST00000622697 SLC31A2O15432 143 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 PMS2P11Q13670 270 aa14.04□□□□□ -0.16
GABRB3-215ENST00000622697 NPDC1Q9NQX5 325 aaPredicted RBP14.04□□□□□ -0.16
GABRB3-215ENST00000622697 AP4M1O00189 453 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 TOMM20LQ6UXN7 152 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 LHFPL5Q8TAF8 219 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 NAT8BQ9UHF3 227 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 TMEM229AB2RXF0 380 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 J3QT63 122 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 GYPAP02724 150 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 SLC36A1Q7Z2H8 476 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 GPR87Q9BY21 358 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 BARX1Q9HBU1 254 aaPredicted RBP14.03□□□□□ -0.16
GABRB3-215ENST00000622697 IL36GQ9NZH8 169 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 A0A1W2PPE3 182 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 GNB2P62879 340 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 PUSL1Q8N0Z8 303 aaKnown RBP14.03□□□□□ -0.16
GABRB3-215ENST00000622697 ONECUT1Q9UBC0 465 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 MFSD2BA6NFX1 497 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 TMPRSS2O15393 492 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 RAMP1O60894 148 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 RAB5AP20339 215 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 BSXQ3C1V8 233 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 CRIPAKQ8N1N5 446 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 C5orf66Q9H5L9 145 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 TIMM9Q9Y5J7 89 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 IGKV1D-43A0A0B4J1Z2 117 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 CRYM-AS1A6NIL9 109 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 CDS2O95674 445 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 CRYABP02511 175 aaKnown RBP14.03□□□□□ -0.16
GABRB3-215ENST00000622697 IGKV3-11P04433 115 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 SUMO1P63165 101 aaKnown RBP14.03□□□□□ -0.16
GABRB3-215ENST00000622697 CLN8Q9UBY8 286 aa14.03□□□□□ -0.16
GABRB3-215ENST00000622697 A0A1W2PQM1 296 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 OOEPA6NGQ2 149 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 DBX1A6NMT0 343 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 MFNGO00587 321 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 EIF3GO75821 320 aaKnown RBP eCLIP14.02□□□□□ -0.16
GABRB3-215ENST00000622697 HLA-GP17693 338 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 MDKP21741 143 aaPredicted RBP14.02□□□□□ -0.16
GABRB3-215ENST00000622697 PPP1CCP36873 323 aaKnown RBP14.02□□□□□ -0.16
GABRB3-215ENST00000622697 SNX22Q96L94 193 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 NRIP2Q9BQI9 281 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 NCBP2LA6PVI3 153 aaKnown RBP14.02□□□□□ -0.16
GABRB3-215ENST00000622697 IGLV3-21P80748 117 aaPredicted RBP14.02□□□□□ -0.16
GABRB3-215ENST00000622697 PMS2CLQ68D20 193 aa14.02□□□□□ -0.16
GABRB3-215ENST00000622697 NEIL1Q96FI4 390 aaPredicted RBP14.02□□□□□ -0.16
GABRB3-215ENST00000622697 COX7A1P24310 79 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 UBE2V2Q15819 145 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 VMA21Q3ZAQ7 101 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 HES7Q9BYE0 225 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 ST8SIA5O15466 376 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 MBPP02686 304 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-215ENST00000622697 GNG4P50150 75 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 SPNS3Q6ZMD2 512 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 HSD17B10Q99714 261 aaKnown RBP14.02□□□□□ -0.17
GABRB3-215ENST00000622697 ANGPTL4Q9BY76 406 aa14.02□□□□□ -0.17
GABRB3-215ENST00000622697 C11orf94C9JXX5 98 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 TPPP2P59282 170 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 MRPS11P82912 194 aaKnown RBP14.01□□□□□ -0.17
GABRB3-215ENST00000622697 ARL16Q0P5N6 197 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 C2orf68Q2NKX9 166 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 FBXW9Q5XUX1 488 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 BHLHA15Q7RTS1 189 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-215ENST00000622697 HS3ST3B1Q9Y662 390 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 FCN1O00602 326 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 DEDDO75618 318 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 FGF2P09038 288 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 SEC11BP0C7V7 166 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 SLC23A3Q6PIS1 610 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 SSX7Q7RTT5 188 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 HSF4Q9ULV5 492 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 OR5I1Q13606 314 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 CXorf66Q5JRM2 361 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-215ENST00000622697 IL22RA2Q969J5 263 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 TMEM204Q9BSN7 226 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 PRSS50Q9UI38 385 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 SPAARA0A1B0GVQ0 90 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 A0A1W2PRD5 423 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 A0A1W2PRF3 423 aa14.01□□□□□ -0.17
GABRB3-215ENST00000622697 A0A1W2PRM7 423 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms