RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 MEIOCA2RUB1 952 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 FAM25AB3EWG3 89 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 FAM25CB3EWG5 89 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 FAM25GB3EWG6 89 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 XRCC3O43542 346 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 TOX4O94842 621 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 IGHV3-7P01780 117 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 FCER2P06734 321 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 RANBP1P43487 201 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 TAS2R20P59543 309 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 DYNC1I2Q13409 638 aaKnown RBP11.16□□□□□ -0.62
NEK3-210ENST00000620675 LTC4SQ16873 150 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 CNPY1Q3B7I2 92 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 C11orf91Q3C1V1 193 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 HCP5Q6MZN7 132 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 MZT2AQ6P582 158 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 PNKDQ8N490 385 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 CORO2AQ92828 525 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 TNFRSF14Q92956 283 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 S100A16Q96FQ6 103 aaKnown RBP11.16□□□□□ -0.62
NEK3-210ENST00000620675 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
NEK3-210ENST00000620675 TRAPPC2LQ9UL33 140 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 IGKV1D-8A0A087WSZ0 117 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 A0A1W2PRD5 423 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 A0A1W2PRF3 423 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 A0A1W2PRM7 423 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 C17orf98A8MV24 154 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 C15orf65H3BRN8 121 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 HLA-DQB1P01920 261 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 TMEM69Q5SWH9 247 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 CNIH2Q6PI25 160 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 PRR18Q8N4B5 295 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 OR1L1Q8NH94 360 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 SETD6Q8TBK2 473 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 AUNIPQ9H7T9 357 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 CHMP1AQ9HD42 196 aaPredicted RBP11.16□□□□□ -0.62
NEK3-210ENST00000620675 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 MRPS7Q9Y2R9 242 aaKnown RBP11.16□□□□□ -0.62
NEK3-210ENST00000620675 UBE2J1Q9Y385 318 aaPredicted RBP11.16□□□□□ -0.62
NEK3-210ENST00000620675 KPTNQ9Y664 436 aa11.16□□□□□ -0.62
NEK3-210ENST00000620675 RNASEK-C17orf49H0YIS7 233 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 HOXB4P17483 251 aaPredicted RBP11.15□□□□□ -0.62
NEK3-210ENST00000620675 ARFRP1Q13795 201 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 HACD4Q5VWC8 232 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 ZNF880Q6PDB4 577 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 LEAP2Q969E1 77 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 LHX4Q969G2 390 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 PHF21AQ96BD5 680 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.15□□□□□ -0.62
NEK3-210ENST00000620675 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 MBNL3Q9NUK0 354 aaKnown RBP11.15□□□□□ -0.62
NEK3-210ENST00000620675 OR6C3Q9NZP0 311 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 ZNRD1Q9P1U0 126 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 EXTL2Q9UBQ6 330 aa11.15□□□□□ -0.62
NEK3-210ENST00000620675 IGHV3-43A0A0B4J1X8 118 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 TRAV40A0A0B4J280 105 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 KBTBD11-OT1A0A1B0GTJ5 212 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 FUOMA2VDF0 154 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 FCGR3AP08637 254 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 IGHV3-43DP0DP04 118 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 GATA3P23771 443 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 RUSC1-AS1Q66K80 236 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 SNX29P2Q8IUI4 249 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 ARL11Q969Q4 196 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 UPRTQ96BW1 309 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 KIRREL1Q96J84 757 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 NCOR1P1Q9H4R4 102 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 C12orf4Q9NQ89 552 aa11.15□□□□□ -0.63
NEK3-210ENST00000620675 CENPVL3A0A0U1RRI6 287 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 SERPINE3A8MV23 424 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 M0R1W7 72 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 CLPXO76031 633 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 GSTP1P09211 210 aaKnown RBP11.14□□□□□ -0.63
NEK3-210ENST00000620675 CD3GP09693 182 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 COX7A1P24310 79 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 TNFSF8P32971 234 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 FAM189A2Q15884 450 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 RNASE12Q5GAN4 147 aaKnown RBP11.14□□□□□ -0.63
NEK3-210ENST00000620675 BRD3OSQ6XYD6 125 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 KIR3DL3Q8N743 410 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 ZNF565Q8N9K5 539 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 C22orf15Q8WYQ4 148 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 Q9N2K0 584 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 LPAR3Q9UBY5 353 aa11.14□□□□□ -0.63
NEK3-210ENST00000620675 A0A0A6YYH2 397 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 A6NJ64 397 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
NEK3-210ENST00000620675 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 H3BUI4 141 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 J3QLI3 93 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 CA11O75493 328 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 FSHBP01225 129 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 HBZP02008 142 aa11.13□□□□□ -0.63
NEK3-210ENST00000620675 SCTP09683 121 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms