RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 C17orf82Q86X59 251 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-210ENST00000618939 BAGE3Q86Y29 109 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 BAGE2Q86Y30 109 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 UBAC2Q8NBM4 344 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 SLC35E1Q96K37 410 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 CXXC4Q9H2H0 198 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 GLRX2Q9NS18 164 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 RPH3ALQ9UNE2 315 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 A0A1B0GU03 582 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 F6UZH7 168 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 LY6G6FQ5SQ64 297 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 WNT2BQ93097 391 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 HEXA-AS1Q9H8Q6 139 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 TRGV10A0A0A0MS01 117 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 A8MXK9 166 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 HAND1O96004 215 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 SPP1P10451 314 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 PSG2P11465 335 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 NPBWR1P48145 328 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 WFDC8Q8IUA0 241 aa12.03□□□□□ -0.48
CNOT3-210ENST00000618939 RCC2Q9P258 522 aaKnown RBP12.03□□□□□ -0.48
CNOT3-210ENST00000618939 F2RP25116 425 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 IL3RAP26951 378 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 FADS6Q8N9I5 356 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 SLC25A40Q8TBP6 338 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.48
CNOT3-210ENST00000618939 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 IFT22Q9H7X7 185 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 ATP23Q9Y6H3 246 aa12.02□□□□□ -0.48
CNOT3-210ENST00000618939 ZNF708P17019 499 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 TRIP6Q15654 476 aaKnown RBP12.02□□□□□ -0.49
CNOT3-210ENST00000618939 SSX2Q16385 188 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FBLN5Q9UBX5 448 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 DNAJC13O75165 2243 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 A0A1W2PPE2 198 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 AQP7O14520 342 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 ZNF737O75373 536 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 MEOX2P50222 304 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 MRPL14Q6P1L8 145 aaKnown RBP12.02□□□□□ -0.49
CNOT3-210ENST00000618939 TMEM147Q9BVK8 224 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 OR2J1Q9GZK6 312 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 V9GYS6 101 aa12.02□□□□□ -0.49
CNOT3-210ENST00000618939 PITX3O75364 302 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 ZNF735P0CB33 412 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 RD3LP0DJH9 198 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 SPINK9Q5DT21 86 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 TRAT1Q6PIZ9 186 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 TM2D1Q9BX74 207 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-210ENST00000618939 GDF9O60383 454 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 OR7C2O60412 319 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 ZIC3O60481 467 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 HNF1AP20823 631 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 ZNF90Q03938 601 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 TLE1Q04724 770 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 ATP6V1FQ16864 119 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 TMEM241Q24JQ0 296 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 ASPHD2Q6ICH7 369 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 PPP1R32Q7Z5V6 425 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 PAQR4Q8N4S7 273 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-210ENST00000618939 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 OR10S1Q8NGN2 331 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 EP300Q09472 2414 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-210ENST00000618939 PLXND1Q9Y4D7 1925 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 RAB5AP20339 215 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 RUNX1Q01196 453 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 FAM210BQ96KR6 192 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 PRDM14Q9GZV8 571 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 SYNGR1O43759 233 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 CYTIPO60759 359 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 KLK2P20151 261 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 NPBWR2P48146 333 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
CNOT3-210ENST00000618939 BATFQ16520 125 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 BTNL3Q6UXE8 466 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 OR10G4Q8NGN3 311 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 OR10G9Q8NGN4 311 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 OR10G7Q8NGN6 311 aa12.01□□□□□ -0.49
CNOT3-210ENST00000618939 RSRP1Q9BUV0 290 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms