RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SYT14P1Q58G82 188 aa10.44□□□□□ -0.74
SRRT-216ENST00000618262 WDR25Q64LD2 544 aaPredicted RBP10.44□□□□□ -0.74
SRRT-216ENST00000618262 ZNF626Q68DY1 528 aa10.44□□□□□ -0.74
SRRT-216ENST00000618262 OR8I2Q8N0Y5 310 aa10.44□□□□□ -0.74
SRRT-216ENST00000618262 FADS6Q8N9I5 356 aa10.44□□□□□ -0.74
SRRT-216ENST00000618262 SNRNP40Q96DI7 357 aaKnown RBP10.44□□□□□ -0.74
SRRT-216ENST00000618262 CPAMD8Q8IZJ3 1885 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 H7C1C5 153 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 IGHV3-9P01782 118 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 TRGC1P0CF51 173 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 ART1P52961 327 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 LCN6P62502 163 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 MLLT11Q13015 90 aaPredicted RBP10.43□□□□□ -0.74
SRRT-216ENST00000618262 OR2F1Q13607 317 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 C1DQ13901 141 aaKnown RBP10.43□□□□□ -0.74
SRRT-216ENST00000618262 VAMP3Q15836 100 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 ASB10Q8WXI3 467 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 DUX5Q96PT3 197 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 EMC6Q9BV81 110 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 SPRR3Q9UBC9 169 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 B4GALT7Q9UBV7 327 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 LSM2Q9Y333 95 aaKnown RBP10.43□□□□□ -0.74
SRRT-216ENST00000618262 HDGFL3Q9Y3E1 203 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 DIDO1Q9BTC0 2240 aaKnown RBP10.43□□□□□ -0.74
SRRT-216ENST00000618262 A0A0J9YW62 118 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 E9PQ18 207 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 CXCL13O43927 109 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 CD14P08571 375 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 OR13C7P0DN81 318 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 PSG1P11464 419 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 ZBTB25P24278 435 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 SOX2P48431 317 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 ZNF345Q14585 488 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 PCK2Q16822 640 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 GCSAMLQ5JQS6 135 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 TCTEX1D4Q5JR98 221 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 RPRMLQ8N4K4 120 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 C20orf24Q9BUV8 137 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 POLR2J3Q9H1A7 115 aaKnown RBP10.43□□□□□ -0.74
SRRT-216ENST00000618262 ELOVL5Q9NYP7 299 aa10.43□□□□□ -0.74
SRRT-216ENST00000618262 POLR3KQ9Y2Y1 108 aaPredicted RBP10.43□□□□□ -0.74
SRRT-216ENST00000618262 IGHV2OR16-5A0A0B4J2B6 119 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 ST8SIA3O43173 380 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.745e-7■■□□□ 12.7
SRRT-216ENST00000618262 CDS2O95674 445 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 FAHP16930 419 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 RPL4P36578 427 aaKnown RBP10.42□□□□□ -0.74
SRRT-216ENST00000618262 CLDN15P56746 228 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 IL13RA1P78552 427 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 C1orf140Q5VVS0 124 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 Q6ZS92 163 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 ACOT7LQ6ZUV0 252 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 TMEM99Q8N816 258 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 ZFP62Q8NB50 900 aaPredicted RBP10.42□□□□□ -0.74
SRRT-216ENST00000618262 POP5Q969H6 163 aaKnown RBP10.42□□□□□ -0.74
SRRT-216ENST00000618262 KCTD12Q96CX2 325 aaKnown RBP10.42□□□□□ -0.74
SRRT-216ENST00000618262 KIRREL1Q96J84 757 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 GABARAPL3Q9BY60 117 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 NELFAQ9H3P2 528 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 SLC2A10O95528 541 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 CD37P11049 281 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 PSMB1P20618 241 aaKnown RBP10.42□□□□□ -0.74
SRRT-216ENST00000618262 PCSK4Q6UW60 755 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 IGFL2Q6UWQ7 119 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 BATF2Q8N1L9 274 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 OR1J2Q8NGS2 313 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 ZNF417Q8TAU3 575 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 ZNF587Q96SQ5 575 aaPredicted RBP10.42□□□□□ -0.74
SRRT-216ENST00000618262 PRORYQ9H606 182 aa10.42□□□□□ -0.74
SRRT-216ENST00000618262 TRGV5A0A0B4J1U4 118 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 PRSS37A4D1T9 235 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 TSPAN15O95858 294 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 KNG1P01042 644 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 TRGC2P03986 189 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 BMP5P22003 454 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 GRPRP30550 384 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 H2BFSP57053 126 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 GTF3C1Q12789 2109 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 MYO7BQ6PIF6 2116 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 MBOAT2Q6ZWT7 520 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 ZNF440Q8IYI8 595 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 FNDC9Q8TBE3 224 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 ASB13Q8WXK3 278 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 GPR146Q96CH1 333 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 SRXN1Q9BYN0 137 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 MED29Q9NX70 200 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 CHD3Q12873 2000 aaKnown RBP10.41□□□□□ -0.74
SRRT-216ENST00000618262 SYT7O43581 403 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 SRD5A2P31213 254 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 B3GALT5-AS1P59052 145 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 RPS23P62266 143 aaKnown RBP10.41□□□□□ -0.74
SRRT-216ENST00000618262 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 STPG4Q8N801 248 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 ZBTB8AQ96BR9 441 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 C20orf144Q9BQM9 153 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 SSBP4Q9BWG4 385 aaPredicted RBP10.41□□□□□ -0.74
SRRT-216ENST00000618262 GTSF1LQ9H1H1 148 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 TRIM36Q9NQ86 728 aa10.41□□□□□ -0.74
SRRT-216ENST00000618262 TAS2R5Q9NYW4 299 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms