RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CLCF1Q9UBD9 225 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 OR2W1Q9Y3N9 320 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 H0Y8G0 127 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 MEF2BQ02080 365 aaPredicted RBP12.74□□□□□ -0.37
VPS36-207ENST00000611132 OR10AD1Q8NGE0 317 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TMEM230Q96A57 120 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 BSCL2Q96G97 398 aaPredicted RBP12.74□□□□□ -0.37
VPS36-207ENST00000611132 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 BOD1Q96IK1 185 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 P2RX4Q99571 388 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TRAV34A0A0B4J273 112 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 NPIPB13A6NJU9 1138 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 NPIPB4C9JG80 1138 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 Q8IYB0 196 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TMEM30CPA0ZSE6 113 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 TGFBR3LH3BV60 316 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 RAC3P60763 192 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 WIPI1Q5MNZ9 446 aaPredicted RBP12.73□□□□□ -0.37
VPS36-207ENST00000611132 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 OR2M3Q8NG83 312 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 LOC390937A0A1W2PQ73 354 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 A0A1W2PR80 420 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 NGFP01138 241 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 ADCYAP1P18509 176 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 F2RP25116 425 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 PTTG1IPP53801 180 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 LINC00696Q6ZRV3 163 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 LURAP1LQ8IV03 231 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 D2HGDHQ8N465 521 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 OR4C5Q8NGB2 326 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
VPS36-207ENST00000611132 UCN2Q96RP3 112 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 PCGF1Q9BSM1 259 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 PAM16Q9Y3D7 125 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
VPS36-207ENST00000611132 SPINK4O60575 86 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 RNF224P0DH78 156 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 PSG2P11465 335 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 UBE2G1P62253 170 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
VPS36-207ENST00000611132 OR5AU1Q8NGC0 362 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 GOLT1BQ9Y3E0 138 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 CBY3A6NI87 242 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 SOX15O60248 233 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 SRP19P09132 144 aaKnown RBP12.73□□□□□ -0.37
VPS36-207ENST00000611132 BCL3P20749 454 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 FAM162BQ5T6X4 162 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 MYPOPQ86VE0 399 aaPredicted RBP12.73□□□□□ -0.37
VPS36-207ENST00000611132 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 FBLN5Q9UBX5 448 aa12.73□□□□□ -0.37
VPS36-207ENST00000611132 CD46P15529 392 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 ZXDAP98168 799 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
VPS36-207ENST00000611132 OR5I1Q13606 314 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 SPATA46Q5T0L3 261 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 PAQR4Q8N4S7 273 aaPredicted RBP12.72□□□□□ -0.37
VPS36-207ENST00000611132 CCDC74BQ96LY2 380 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 ZDHHC8Q9ULC8 765 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 SELEP16581 610 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 PAX5Q02548 391 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 MARS2Q96GW9 593 aaKnown RBP12.72□□□□□ -0.37
VPS36-207ENST00000611132 SF3B5Q9BWJ5 86 aaKnown RBP12.72□□□□□ -0.37
VPS36-207ENST00000611132 CISD1Q9NZ45 108 aaKnown RBP12.72□□□□□ -0.37
VPS36-207ENST00000611132 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 A0A087WWC5 75 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 RAMP1O60894 148 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 HIST1H1BP16401 226 aaKnown RBP12.72□□□□□ -0.37
VPS36-207ENST00000611132 AGAP20933 346 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 TAS2R60P59551 318 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 FAM27BQ5VT28 67 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 C1QL2Q7Z5L3 287 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 TGIF2LXQ8IUE1 241 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 OR1K1Q8NGR3 316 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 S1PR3Q99500 378 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
VPS36-207ENST00000611132 OR5B21A6NL26 309 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 EIF3IQ13347 325 aaKnown RBP12.71□□□□□ -0.37
VPS36-207ENST00000611132 SPSB2Q99619 263 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 ARL2-SNX15V9GYD0 113 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 A6NCN8 305 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 IGKV3-11P04433 115 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 UCP3P55916 312 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 COTL1Q14019 142 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 Q6ZN92 141 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 TMEM183AQ8IXX5 376 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 Q8WTZ3 238 aa12.71□□□□□ -0.37
VPS36-207ENST00000611132 AURKAIP1Q9NWT8 199 aaPredicted RBP12.71□□□□□ -0.37
VPS36-207ENST00000611132 IGKV1D-43A0A0B4J1Z2 117 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 H0Y980 276 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 LAMTOR5O43504 91 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 CA6P23280 308 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 FAM166AQ6J272 317 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 SLC35E1Q96K37 410 aa12.71□□□□□ -0.38
VPS36-207ENST00000611132 OR2D2Q9H210 308 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms