RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SP1P08047 785 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 SEC11BP0C7V7 166 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 TMEM182Q6ZP80 229 aaPredicted RBP13.78□□□□□ -0.2
RTN1-209ENST00000611068 ZNF703Q9H7S9 590 aaPredicted RBP13.78□□□□□ -0.2
RTN1-209ENST00000611068 MSL2Q9HCI7 577 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 VAX2Q9UIW0 290 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 RPH3ALQ9UNE2 315 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 TMEM14AQ9Y6G1 99 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 SVILO95425 2214 aa13.78□□□□□ -0.2
RTN1-209ENST00000611068 TRDCB7Z8K6 153 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 ANOS1P23352 680 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 MMP16P51512 607 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 CSNK2A1P68400 391 aaPredicted RBP13.77□□□□□ -0.2
RTN1-209ENST00000611068 HOGA1Q86XE5 327 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 ZIC4Q8N9L1 334 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 ADPRHL1Q8NDY3 354 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 NUDT10Q8NFP7 164 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 NIPSNAP3BQ9BS92 247 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 ARV1Q9H2C2 271 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 ZNF552Q9H707 407 aaPredicted RBP13.77□□□□□ -0.2
RTN1-209ENST00000611068 FKBP11Q9NYL4 201 aa13.77□□□□□ -0.2
RTN1-209ENST00000611068 ZNF107Q9UII5 783 aaPredicted RBP13.77□□□□□ -0.2
RTN1-209ENST00000611068 IFNA6P05013 189 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 DMRTC1Q5HYR2 192 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 RNFT1Q5M7Z0 435 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 OR52N5Q8NH56 324 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 CYYR1Q96J86 154 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 TP53RKQ96S44 253 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 PIEZO2Q9H5I5 2752 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 A0A1B0GW64 132 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 LMX1BO60663 402 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 ZNF17P17021 662 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 SLC25A26Q70HW3 274 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.77□□□□□ -0.21
RTN1-209ENST00000611068 GBGT1Q8N5D6 347 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 HAS2Q92819 552 aa13.77□□□□□ -0.21
RTN1-209ENST00000611068 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.77□□□□□ -0.21
RTN1-209ENST00000611068 K7EP13 123 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 GFRA1P56159 465 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 PRSS8Q16651 343 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 C9orf135Q5VTT2 229 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 RNF150Q9ULK6 438 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 LSM5Q9Y4Y9 91 aaKnown RBP13.76□□□□□ -0.21
RTN1-209ENST00000611068 NDUFB8O95169 186 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 CD55P08174 381 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 CSNK1A1P48729 337 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 TAS2R31P59538 309 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 RAC3P60763 192 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
RTN1-209ENST00000611068 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 WDR25Q64LD2 544 aaPredicted RBP13.76□□□□□ -0.21
RTN1-209ENST00000611068 CMTM1Q8IZ96 169 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 OR10S1Q8NGN2 331 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 OR2V1Q8NHB1 315 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 AQP3Q92482 292 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 DCBLD2Q96PD2 775 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 LHFPL6Q9Y693 200 aa13.76□□□□□ -0.21
RTN1-209ENST00000611068 LOC105371242A0A075B767 164 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 TMEM238C9JI98 176 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 M0QZ24 198 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 H2BFMP0C1H6 154 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 MMP9P14780 707 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 CFPP27918 469 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 IDH3GP51553 393 aaPredicted RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 COL5A1-AS1Q5SY13 56 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 KCTD18Q6PI47 426 aaPredicted RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 CHST4Q8NCG5 386 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 SLAMF6Q96DU3 332 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 PRRX2Q99811 253 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 NAGKQ9UJ70 344 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 APC2O95996 2303 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 GJE1A6NN92 205 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 ZNF705FA8MVS1 300 aaPredicted RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 ZNF705DP0CH99 300 aaPredicted RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 ZNF705BP0CI00 300 aaPredicted RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 CD33P20138 364 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 RND2P52198 227 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 GNB2P62879 340 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 ZNF766Q5HY98 468 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 SPSB3Q6PJ21 355 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 Q6ZVH6 145 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 MRPL52Q86TS9 123 aaKnown RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 TMEM18Q96B42 140 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 SDSLQ96GA7 329 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 C4orf45Q96LM5 186 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 TBX15Q96SF7 602 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 ALKBH7Q9BT30 221 aaPredicted RBP13.75□□□□□ -0.21
RTN1-209ENST00000611068 CABLES2Q9BTV7 478 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 COMMD4Q9H0A8 199 aa13.75□□□□□ -0.21
RTN1-209ENST00000611068 FREM1Q5H8C1 2179 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 DOCK7Q96N67 2140 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 K7N7A8 449 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 ALDH3B1P43353 468 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 FOXC1Q12948 553 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 ICAM4Q14773 271 aa13.74□□□□□ -0.21
RTN1-209ENST00000611068 IAH1Q2TAA2 248 aaPredicted RBP13.74□□□□□ -0.21
RTN1-209ENST00000611068 ZNF260Q3ZCT1 412 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms