RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FGF16O43320 207 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 GCH1P30793 250 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 EIF2S3P41091 472 aaKnown RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 CLEC9AQ6UXN8 241 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 ZNF826PQ6ZT77 177 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 RPRMLQ8N4K4 120 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 PLEKHA2Q9HB19 425 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 TREM2Q9NZC2 230 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 ERRFI1Q9UJM3 462 aaPredicted RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 IGHV2OR16-5A0A0B4J2B6 119 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 A6NLC8 198 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 ST8SIA3O43173 380 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 IGLV1-44P01699 117 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 CEBPDP49716 269 aaPredicted RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 EIF5AP63241 154 aaKnown RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 ZNF324BQ6AW86 544 aaPredicted RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 FIP1L1Q6UN15 594 aaKnown RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 ZNF497Q6ZNH5 498 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 STPG2Q8N412 459 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 RBMXL3Q8N7X1 1067 aaKnown RBP11.53□□□□□ -0.56
NEK3-205ENST00000610828 UBALD1Q8TB05 177 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 TMEM56Q96MV1 263 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 CABLES2Q9BTV7 478 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 MSL2Q9HCI7 577 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 ZFP57Q9NU63 452 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 OR1A1Q9P1Q5 309 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 AMDHD2Q9Y303 409 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 TMEM56-RWDD3S4R434 201 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 ATMQ13315 3056 aa11.52□□□□□ -0.56
NEK3-205ENST00000610828 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.57
NEK3-205ENST00000610828 ZNF718Q3SXZ3 478 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 H1FOOQ8IZA3 346 aaPredicted RBP11.52□□□□□ -0.57
NEK3-205ENST00000610828 SELENOHQ8IZQ5 122 aaKnown RBP11.52□□□□□ -0.57
NEK3-205ENST00000610828 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 HEATR1Q9H583 2144 aaKnown RBP11.52□□□□□ -0.57
NEK3-205ENST00000610828 WNT9BO14905 357 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 HSPA12AO43301 675 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 CDS2O95674 445 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 HAND1O96004 215 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 MOB1BQ7L9L4 216 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 OR4D5Q8NGN0 318 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 ERGIC1Q969X5 290 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 MARC2Q969Z3 335 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 CXXC4Q9H2H0 198 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 PIGMQ9H3S5 423 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 TAAR3PQ9P1P4 343 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 FAM215AQ9Y5M1 114 aa11.52□□□□□ -0.57
NEK3-205ENST00000610828 ZNF705EA8MWA4 302 aaPredicted RBP11.51□□□□□ -0.57
NEK3-205ENST00000610828 PGLYRP1O75594 196 aaPredicted RBP11.51□□□□□ -0.57
NEK3-205ENST00000610828 JTBO76095 146 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 FAM157CP0CG43 387 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 KITLGP21583 273 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 S100GP29377 79 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 Q6ZR03 302 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 LILRB1Q8NHL6 650 aaPredicted RBP11.51□□□□□ -0.57
NEK3-205ENST00000610828 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
NEK3-205ENST00000610828 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 RCL1Q9Y2P8 373 aaKnown RBP11.51□□□□□ -0.57
NEK3-205ENST00000610828 SLC25A15Q9Y619 301 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 DMXL2Q8TDJ6 3036 aa11.51□□□□□ -0.57
NEK3-205ENST00000610828 PTPRZ1P23471 2315 aaPredicted RBP11.51□□□□□ -0.57
NEK3-205ENST00000610828 ADAM20O43506 726 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 PSPNO60542 156 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 FBXO24O75426 580 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 TUBG1P23258 451 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 UCP1P25874 307 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 GNMTQ14749 295 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 SHEQ5VZ18 495 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 EIF5AL1Q6IS14 154 aaKnown RBP11.5□□□□□ -0.57
NEK3-205ENST00000610828 C11orf53Q8IXP5 236 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 OR10V1Q8NGI7 309 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 OR51H1Q8NH63 302 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 HES4Q9HCC6 221 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 TUBG2Q9NRH3 451 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 H0Y980 276 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 CRYABP02511 175 aaKnown RBP11.5□□□□□ -0.57
NEK3-205ENST00000610828 F2RP25116 425 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 NKX2-1P43699 371 aaPredicted RBP11.5□□□□□ -0.57
NEK3-205ENST00000610828 SPIN2AQ99865 258 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 SPIN2BQ9BPZ2 258 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 MS4A7Q9GZW8 240 aaPredicted RBP11.5□□□□□ -0.57
NEK3-205ENST00000610828 LPAR3Q9UBY5 353 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 GLS2Q9UI32 602 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 ZDHHC8Q9ULC8 765 aa11.5□□□□□ -0.57
NEK3-205ENST00000610828 RBM7Q9Y580 266 aaKnown RBP11.5□□□□□ -0.57
NEK3-205ENST00000610828 SIGLEC5O15389 551 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 GPR137BO60478 399 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 APOC3P02656 99 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 GAPDHP04406 335 aaKnown RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 ACAA1P09110 424 aaPredicted RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 P2RY1P47900 373 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 ZNF83P51522 516 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 C1orf185Q5T7R7 199 aa11.49□□□□□ -0.57
NEK3-205ENST00000610828 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 ZNF474Q6S9Z5 364 aaPredicted RBP11.49□□□□□ -0.57
NEK3-205ENST00000610828 WDR82Q6UXN9 313 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms