RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 DYNLT3P51808 116 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 LOXL3P58215 753 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 FABP5Q01469 135 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 RBM39Q14498 530 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 ATAD3CQ5T2N8 411 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 ZNF626Q68DY1 528 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 SUMF2Q8NBJ7 301 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 MRAPQ8TCY5 172 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 PRSS22Q9GZN4 317 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 ABCB10Q9NRK6 738 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 NDUFB11Q9NX14 153 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 ING3Q9NXR8 418 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 SESN1Q9Y6P5 492 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 PLXNB1O43157 2135 aa14.11□□□□□ -0.15
SHKBP1-203ENST00000594298 MEIKINA0A087WXM9 373 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 MEX3AA1L020 520 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 ZNF729A6NN14 1252 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 ARG1P05089 322 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 MGMTP16455 207 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 GALP22466 123 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 PSMB9P28065 219 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 HTR2CP28335 458 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 RAB13P51153 203 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 PAX5Q02548 391 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 SSX1Q16384 188 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 KCTD21Q4G0X4 260 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 LDLRAD2Q5SZI1 272 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 TCF23Q7RTU1 214 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 OR6M1Q8NGM8 313 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 R3HDM4Q96D70 268 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 COQ2Q96H96 371 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 CITED2Q99967 270 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 SELENOIQ9C0D9 397 aa14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 PPIL3Q9H2H8 161 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-203ENST00000594298 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 A0A1W2PP11 408 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 MCRIP1C9JLW8 97 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 PDCD5O14737 125 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 GLAP06280 429 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 CD37P11049 281 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 SSX2Q16385 188 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 PLA1AQ53H76 456 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 HEPN1Q6WQI6 88 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 TMEM219Q86XT9 240 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 KCNG3Q8TAE7 436 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 NEK7Q8TDX7 302 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 PHF21AQ96BD5 680 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 BANF2Q9H503 90 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 PLGRKTQ9HBL7 147 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 AURKAIP1Q9NWT8 199 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 KIF25Q9UIL4 384 aa14.09□□□□□ -0.15
SHKBP1-203ENST00000594298 TMEM30CPA0ZSE6 113 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 SLC22A1O15245 554 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 BPNT1O95861 308 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 MYL9P24844 172 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 RSBN1Q5VWQ0 802 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 CD200R1LQ6Q8B3 271 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 RTN4RL2Q86UN3 420 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 TMEM133Q9H2Q1 129 aa14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 AK6Q9Y3D8 172 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-203ENST00000594298 TRAV1-2A0A0B4J238 106 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 KBTBD11-OT1A0A1B0GTJ5 212 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 MPIG6BO95866 241 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 GZMHP20718 246 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 FUT3P21217 361 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 CDK2P24941 298 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 DYNC1I2Q13409 638 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 MINOS1Q5TGZ0 78 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 RAB12Q6IQ22 244 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 TMEM104Q8NE00 496 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 WFDC9Q8NEX5 89 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 PLPPR1Q8TBJ4 325 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 Q96M66 194 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 RAB9BQ9NP90 201 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 RCC2Q9P258 522 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 PEX16Q9Y5Y5 336 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 MINOS1-NBL1R4GNA1 71 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 V9GY05 133 aa14.07□□□□□ -0.16
SHKBP1-203ENST00000594298 SLC17A2O00624 439 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 PEX14O75381 377 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 CA11O75493 328 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 TNFAIP8O95379 198 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 ARSBP15848 533 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 GLP1RP43220 463 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 BLCAPP62952 87 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 RAB11BQ15907 218 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 Q6ZS46 218 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 OR2W3Q7Z3T1 314 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 OR10A7Q8NGE5 316 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 NEDD4LQ96PU5 975 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 CLEC7AQ9BXN2 247 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 TMEM59Q9BXS4 323 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 VCX3AQ9NNX9 186 aa14.06□□□□□ -0.16
SHKBP1-203ENST00000594298 IGHV2-26A0A0B4J1V2 119 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms