RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 RBM14Q96PK6 669 aaKnown RBP14.38□□□□□ -0.11
SRSF1-208ENST00000584773 VCXQ9H320 206 aa14.38□□□□□ -0.11
SRSF1-208ENST00000584773 DCLRE1BQ9H816 532 aa14.38□□□□□ -0.11
SRSF1-208ENST00000584773 LIN7BQ9HAP6 207 aa14.38□□□□□ -0.11
SRSF1-208ENST00000584773 A0A1W2PPI3 338 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 G3V4G9 280 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 ZNF780AO75290 641 aaPredicted RBP14.37□□□□□ -0.11
SRSF1-208ENST00000584773 OR2F2O95006 317 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 SNRNP70P08621 437 aaKnown RBP14.37□□□□□ -0.11
SRSF1-208ENST00000584773 C6orf141Q5SZD1 244 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 C10orf99Q6UWK7 81 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 LINC00596Q86U02 117 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 DRAM1Q8N682 238 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 ARL11Q969Q4 196 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 RBMXL1Q96E39 390 aaKnown RBP14.37□□□□□ -0.11
SRSF1-208ENST00000584773 RCC2Q9P258 522 aaKnown RBP14.37□□□□□ -0.11
SRSF1-208ENST00000584773 ERGIC3Q9Y282 383 aa14.37□□□□□ -0.11
SRSF1-208ENST00000584773 LSM2Q9Y333 95 aaKnown RBP14.37□□□□□ -0.11
SRSF1-208ENST00000584773 A0A1W2PRX2 142 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 MT-ND4P03905 459 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 CD1AP06126 327 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 MNDAP41218 407 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 REG1BP48304 166 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 ARHGDIBP52566 201 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-208ENST00000584773 ZNF497Q6ZNH5 498 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 C16orf82Q7Z2V1 217 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 C5orf24Q7Z6I8 188 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 DTX3Q8N9I9 347 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 OR4K15Q8NH41 348 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 FAM46BQ96A09 425 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 CREB3L1Q96BA8 519 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 TMED9Q9BVK6 235 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 SELENOIQ9C0D9 397 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 KCNK15Q9H427 330 aa14.36□□□□□ -0.11
SRSF1-208ENST00000584773 AMMECR1Q9Y4X0 333 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-208ENST00000584773 AIPO00170 330 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 SDCBPO00560 298 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-208ENST00000584773 CRTAPO75718 401 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-208ENST00000584773 OPN1MWP04001 364 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 OPN1MW2P0DN77 364 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 OPN1MW3P0DN78 364 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 MGMTP16455 207 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 ACSM3Q53FZ2 586 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 C9orf152Q5JTZ5 239 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 SIGIRRQ6IA17 410 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 RAB12Q6IQ22 244 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 CCDC144NLQ6NUI1 221 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 OR10X1Q8NGY0 326 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 ETAA1Q9NY74 926 aa14.35□□□□□ -0.11
SRSF1-208ENST00000584773 IGHV3-72A0A0B4J1Y9 119 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A18PA6NE21 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A16PA6NEW6 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A20PA6NIJ5 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A9PA6NNJ1 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A12PA8MX19 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A5PA8MXJ8 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 OOSP1A8MZH6 123 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 SLC31A2O15432 143 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A15PP0C7V4 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A13PP0C7W8 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A14PP0C7W9 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 FAM90A24PP0C7X0 464 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 LOXL3P58215 753 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 MADCAM1Q13477 382 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 GPR176Q14439 515 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 HNF4GQ14541 408 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 TCTEX1D4Q5JR98 221 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 OR10K2Q6IF99 312 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 LRRTM1Q86UE6 522 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 NDUFA11Q86Y39 141 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 OR5AU1Q8NGC0 362 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 OR10A7Q8NGE5 316 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 AKR1E2Q96JD6 320 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 Q96M66 194 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 PCDHB16Q9NRJ7 776 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 PEX16Q9Y5Y5 336 aa14.34□□□□□ -0.11
SRSF1-208ENST00000584773 UBE2QL1A1L167 161 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 C12orf77C9JDV5 145 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 MCRIP1C9JLW8 97 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 GZMHP20718 246 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 HES1Q14469 280 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 IRF3Q14653 427 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 SPHARQ15513 63 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 MED22Q15528 200 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 SYT6Q5T7P8 510 aaPredicted RBP14.33□□□□□ -0.12
SRSF1-208ENST00000584773 RNLSQ5VYX0 342 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 UNQ9370/PRO34162Q6UXP9 181 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 PRR18Q8N4B5 295 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 OR1L1Q8NH94 360 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 R3HDM4Q96D70 268 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 GFOD1Q9NXC2 390 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 NOTCH3Q9UM47 2321 aa14.33□□□□□ -0.12
SRSF1-208ENST00000584773 TGP01266 2768 aa14.32□□□□□ -0.12
SRSF1-208ENST00000584773 H3BUI4 141 aa14.32□□□□□ -0.12
SRSF1-208ENST00000584773 HSD17B6O14756 317 aa14.32□□□□□ -0.12
SRSF1-208ENST00000584773 IGKV1D-33P01593 117 aa14.32□□□□□ -0.12
SRSF1-208ENST00000584773 IGKV1-33P01594 117 aa14.32□□□□□ -0.12
SRSF1-208ENST00000584773 PRB2P02812 416 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms