RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 H3BRN7 92 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 SHOX2O60902 331 aaPredicted RBP1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 RAB36O95755 333 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 CRYGDP07320 174 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 SPNP16150 400 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 PTNP21246 168 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 BGNP21810 368 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 MAGEA6P43360 314 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 DSTNP60981 165 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 PRDX4Q13162 271 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 HTR4Q13639 388 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 STK38Q15208 465 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 HNRNPA1L2Q32P51 320 aaKnown RBP1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 HBMQ6B0K9 141 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 DGAT2L6Q6ZPD8 337 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 OR4K17Q8NGC6 315 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 CLDN23Q96B33 292 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 DNAJC30Q96LL9 226 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 OR52B2Q96RD2 323 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 CXCL16Q9H2A7 254 aa1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 PRRC2BQ5JSZ5 2229 aaKnown RBP1.27□□□□□ -2.21
SMCHD1-207ENST00000581711 A0A1W2PRG6 482 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 C19orf71A6NCJ1 209 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 FAM183AA6NL82 134 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 A8MWP6 167 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 TMEM250H0YL14 139 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 J3QLI3 93 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 hCG_2039718K7EN88 272 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 OTCP00480 354 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 PYCR1P32322 319 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 CBX5P45973 191 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 OR2B6P58173 313 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 TRAM1Q15629 374 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 KRTAP21-3Q3LHN1 58 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 Q6ZSA8 131 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 MUC15Q8N387 334 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 SUN5Q8TC36 379 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 LGALS14Q8TCE9 139 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 CD200R1Q8TD46 325 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 TAPBPLQ9BX59 468 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 HINT2Q9BX68 163 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 TAS2R13Q9NYV9 303 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 CLEC2DQ9UHP7 191 aa1.26□□□□□ -2.21
SMCHD1-207ENST00000581711 IGHV3OR15-7A0A075B7D8 119 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 GSTTP1A0A1W2PQM5 241 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 C8orf87E5RJ46 101 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 I3L4J1 428 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 TOR1AO14656 332 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 FGF16O43320 207 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 CSTAP01040 98 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 GABRA3P34903 492 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 MP68P56378 58 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 TRIP13Q15645 432 aaPredicted RBP1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 SDIM1Q6ZPB5 146 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 Q6ZT83 130 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 FAM58AQ8N1B3 248 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 C2orf73Q8N5S3 287 aaPredicted RBP1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 OR5P2Q8WZ92 322 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 TMBIM4Q9HC24 238 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 IFT46Q9NQC8 304 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 HEY1Q9Y5J3 304 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 BZW2Q9Y6E2 419 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 DOCK10Q96BY6 2186 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 NCKAP5O14513 1909 aa1.25□□□□□ -2.21
SMCHD1-207ENST00000581711 ATAD5Q96QE3 1844 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 RP1L1Q8IWN7 2480 aaPredicted RBP1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 COL4A1P02462 1669 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 TRAV8-2A0A0B4J237 113 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 A0A0G2JQZ4 141 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 LTAP01374 205 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 GZMBP10144 247 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 HSPA13P48723 471 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 XIAPP98170 497 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 BSPH1Q075Z2 132 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 TCAIMQ8N3R3 496 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 ZFAND2AQ8N6M9 145 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 PGLYRP3Q96LB9 341 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 PRSS27Q9BQR3 290 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 EBPLQ9BY08 206 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 BCL2L14Q9BZR8 327 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 WASHC3Q9Y3C0 194 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 LAMB2P55268 1798 aa1.24□□□□□ -2.21
SMCHD1-207ENST00000581711 PTPRKQ15262 1439 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 E7EWF7 191 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 K7EQS6 105 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 CDIPTO14735 213 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 ZMPSTE24O75844 475 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 SOD1P00441 154 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 GTF2H1P32780 548 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 DNASE1L1P49184 302 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 INPP1P49441 399 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 AQP5P55064 265 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 DYNLL1P63167 89 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 CAVIN4Q5BKX8 364 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 LAMTOR1Q6IAA8 161 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 PDCL2Q8N4E4 241 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 MITD1Q8WV92 249 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 LRRC39Q96DD0 335 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 PRRG3Q9BZD7 231 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms