RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CHST5Q9GZS9 411 aa10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 COMMD4Q9H0A8 199 aa10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 PPIL3Q9H2H8 161 aaKnown RBP10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 NCOR1P1Q9H4R4 102 aa10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 IDI2-AS1Q9NZ38 188 aa10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 ZNF107Q9UII5 783 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 CEPT1Q9Y6K0 416 aa10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 R4GMQ9 66 aa10.59□□□□□ -0.71
CSNK1D-219ENST00000581660 CALCBP10092 127 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 REG1BP48304 166 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 ANKRD13BQ86YJ7 626 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 MINDY2Q8NBR6 621 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 OR10A7Q8NGE5 316 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 TMEM106AQ96A25 262 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 BORCS8Q96FH0 119 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 TMED9Q9BVK6 235 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 ELOVL1Q9BW60 279 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 GSTK1Q9Y2Q3 226 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 TMEM14AQ9Y6G1 99 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 WSB1Q9Y6I7 421 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 DNAH17Q9UFH2 4485 aa10.58□□□□□ -0.72
CSNK1D-219ENST00000581660 ARPC1BO15143 372 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 CYB5AP00167 134 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 POLR2IP36954 125 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 GLP1RP43220 463 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 GNG10P50151 68 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 F2RL1P55085 397 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 ATXN7L3Q14CW9 347 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 C12orf73Q69YU5 71 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 Q6P435 159 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 ZNF565Q8N9K5 539 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 DNAAF1Q8NEP3 725 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 TMEM163Q8TC26 289 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 PLEKHA1Q9HB21 404 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 CLN6Q9NWW5 311 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 ENOPH1Q9UHY7 261 aa10.57□□□□□ -0.72
CSNK1D-219ENST00000581660 TRAV41A0A0B4J266 112 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 A0A1W2PQL4 384 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 NUPR2A6NF83 97 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 ZAR1LA6NP61 321 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 ZNF670-ZNF695F2Z2N8 137 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 H0Y980 276 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 SLC33A1O00400 549 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 FSTP19883 344 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 HTR1FP30939 366 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 RBP2P50120 134 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 C1orf146Q5VVC0 180 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 NXNL2Q5VZ03 156 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 AMIGO2Q86SJ2 522 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 RDH10Q8IZV5 341 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 YIPF7Q8N8F6 280 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 OR51T1Q8NGJ9 327 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
CSNK1D-219ENST00000581660 A0A1W2PPE3 182 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ZNF736B4DX44 427 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ATP6V0E1O15342 81 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 RGS11O94810 467 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 BRI3O95415 125 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ZNF44P15621 663 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 FASP25445 335 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 C21orf33P30042 268 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ATP1B3P54709 279 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 PAX5Q02548 391 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 C19orf54Q5BKX5 351 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ZFP1Q6P2D0 407 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 LINC00311Q8N616 119 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 MBOAT4Q96T53 435 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 RSRP1Q9BUV0 290 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ZCCHC4Q9H5U6 513 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 ING3Q9NXR8 418 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 H2AFY2Q9P0M6 372 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 AP4S1Q9Y587 144 aa10.55□□□□□ -0.72
CSNK1D-219ENST00000581660 HERC1Q15751 4861 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 SHISA3A0PJX4 238 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 G3V2T6 193 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 DEDDO75618 318 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 KDM4BO94953 1096 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 SERPINA3P01011 423 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 HLA-DRB1P01911 266 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 ATP6AP1Q15904 470 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 KDM4DQ6B0I6 523 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 PRSS35Q8N3Z0 413 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 CCDC54Q8NEL0 328 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 OR10H4Q8NGA5 316 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 CIB1Q99828 191 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 RHOFQ9HBH0 211 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 KIF25Q9UIL4 384 aa10.54□□□□□ -0.72
CSNK1D-219ENST00000581660 MEIKINA0A087WXM9 373 aa10.53□□□□□ -0.72
CSNK1D-219ENST00000581660 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms