RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 SIRPB1O00241 398 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 GPR137BO60478 399 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 OR2H2O95918 312 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 CDK2P24941 298 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 TALDO1P37837 337 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 RPL15P61313 204 aaKnown RBP12.34□□□□□ -0.43
RAB40B-203ENST00000570676 GUCA2AQ02747 115 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 NKAPLQ5M9Q1 402 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 ATAD3CQ5T2N8 411 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 RAB12Q6IQ22 244 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 Q6P435 159 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 PNKDQ8N490 385 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 CD177Q8N6Q3 437 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 CHST4Q8NCG5 386 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 OR4M1Q8NGD0 313 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 DYRK2Q92630 601 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 DIRAS2Q96HU8 199 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 NEDD4LQ96PU5 975 aa12.34□□□□□ -0.43
RAB40B-203ENST00000570676 TRBV23-1A0A0A0MS06 115 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 A0A0A6YYH2 397 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 A0A1B0GUS0 222 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 A0A1W2PQ09 198 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 A6NJ64 397 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 FOXI3A8MTJ6 420 aaPredicted RBP12.33□□□□□ -0.44
RAB40B-203ENST00000570676 H3BUI4 141 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 NPFFO15130 113 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 PDCD6O75340 191 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 FUT3P21217 361 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 TMEM50BP56557 158 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 COL10A1Q03692 680 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 MADCAM1Q13477 382 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 SIGIRRQ6IA17 410 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 C1orf122Q6ZSJ8 110 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 IZUMO1Q8IYV9 350 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 OR4F5Q8NH21 305 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 RAB3CQ96E17 227 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 IFT22Q9H7X7 185 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 SEBOXQ9HB31 216 aaPredicted RBP12.33□□□□□ -0.44
RAB40B-203ENST00000570676 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
RAB40B-203ENST00000570676 TRAV18A0A075B6X5 111 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 TRAV24A0A0B4J272 114 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 A0A1W2PRD5 423 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 A0A1W2PRF3 423 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 A0A1W2PRM7 423 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 SLC33A1O00400 549 aaPredicted RBP12.32□□□□□ -0.44
RAB40B-203ENST00000570676 HSPB6O14558 160 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 XRCC3O43542 346 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 CRYBA1P05813 215 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 FBP1P09467 338 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 CHATP28329 748 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 SAA4P35542 130 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 LINC00299Q6ZSB3 139 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 Q6ZTK2 550 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 C6orf201Q7Z4U5 140 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 RTN4RL2Q86UN3 420 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 SUMF2Q8NBJ7 301 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 ARHGAP5-AS1Q96IT6 56 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 METTL8Q9H825 291 aaKnown RBP12.32□□□□□ -0.44
RAB40B-203ENST00000570676 BEX1Q9HBH7 125 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 PLEKHJ1Q9NW61 149 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
RAB40B-203ENST00000570676 MRPS7Q9Y2R9 242 aaKnown RBP12.32□□□□□ -0.44
RAB40B-203ENST00000570676 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
RAB40B-203ENST00000570676 CLPSL1A2RUU4 121 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 FABP12A6NFH5 140 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 HIST1H1DP16402 221 aaKnown RBP12.31□□□□□ -0.44
RAB40B-203ENST00000570676 GNB3P16520 340 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 LMO1P25800 156 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 UBE2E1P51965 193 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 TAS2R20P59543 309 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
RAB40B-203ENST00000570676 CDNFQ49AH0 187 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 PAN3Q58A45 887 aaKnown RBP12.31□□□□□ -0.44
RAB40B-203ENST00000570676 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 SPANXN2Q5MJ10 180 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 OLFML2AQ68BL7 652 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 NCR3LG1Q68D85 454 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 FAM131AQ6UXB0 335 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 CCDC190Q86UF4 302 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 FAM185AQ8N0U4 392 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 ASCC1Q8N9N2 400 aaKnown RBP12.31□□□□□ -0.44
RAB40B-203ENST00000570676 NEK7Q8TDX7 302 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
RAB40B-203ENST00000570676 PECRQ9BY49 303 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 VPREB3Q9UKI3 123 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 FAM96BQ9Y3D0 163 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 TRRAPQ9Y4A5 3859 aa12.31□□□□□ -0.44
RAB40B-203ENST00000570676 TMEM82A0PJX8 343 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 UBE2QL1A1L167 161 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 MCRIP1C9JLW8 97 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 KRTAP10-3P60369 221 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 IL18Q14116 193 aa12.3□□□□□ -0.44
RAB40B-203ENST00000570676 ARL6IP1Q15041 203 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms