RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ZNF816Q0VGE8 651 aaPredicted RBP12.17□□□□□ -0.46
NME3-211ENST00000568561 GPR50Q13585 617 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 EBI3Q14213 229 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 GALEQ14376 348 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 PNLIPRP3Q17RR3 467 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 SLC25A30Q5SVS4 291 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 TGIF2LXQ8IUE1 241 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 IZUMO1Q8IYV9 350 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 Q8N9W7 124 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 CCDC107Q8WV48 283 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 PYDC1Q8WXC3 89 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 HSPB9Q9BQS6 159 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 ABCG5Q9H222 651 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 FAM118AQ9NWS6 357 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
NME3-211ENST00000568561 SDCBPO00560 298 aaPredicted RBP12.16□□□□□ -0.46
NME3-211ENST00000568561 SLC31A2O15432 143 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
NME3-211ENST00000568561 PAX5Q02548 391 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
NME3-211ENST00000568561 ZNF529Q6P280 563 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 SYS1Q8N2H4 156 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 OR10A7Q8NGE5 316 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 OR5M8Q8NGP6 311 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 OR8U1Q8NH10 309 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 JAM3Q9BX67 310 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 LIN7CQ9NUP9 197 aaKnown RBP12.16□□□□□ -0.46
NME3-211ENST00000568561 ERVK13-1Q9NX77 482 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 ST3GAL6Q9Y274 331 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 ORC6Q9Y5N6 252 aa12.16□□□□□ -0.46
NME3-211ENST00000568561 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 A0A1W2PP11 408 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 SEC14L6B5MCN3 397 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 C15orf65H3BRN8 121 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 GEMIN2O14893 280 aaKnown RBP12.15□□□□□ -0.46
NME3-211ENST00000568561 MAGEB3O15480 346 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 RAMP3O60896 148 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 GABRB1P18505 474 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 KCNJ3P48549 501 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
NME3-211ENST00000568561 XAF1Q6GPH4 301 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 SLC16A12Q6ZSM3 486 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 TMEM104Q8NE00 496 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 OR2T10Q8NGZ9 312 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 RTN4IP1Q8WWV3 396 aaPredicted RBP12.15□□□□□ -0.46
NME3-211ENST00000568561 ARL11Q969Q4 196 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 ORAI1Q96D31 301 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.46
NME3-211ENST00000568561 MRPL48Q96GC5 212 aaKnown RBP12.15□□□□□ -0.46
NME3-211ENST00000568561 PLSCR3Q9NRY6 295 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 ING4Q9UNL4 249 aa12.15□□□□□ -0.46
NME3-211ENST00000568561 SORL1Q92673 2214 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 SNTNA6NMZ2 147 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 MPZL2O60487 215 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
NME3-211ENST00000568561 NHLRC4P0CG21 123 aaPredicted RBP12.14□□□□□ -0.47
NME3-211ENST00000568561 SERPINA2P20848 420 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 GP2P55259 537 aaKnown RBP12.14□□□□□ -0.47
NME3-211ENST00000568561 FOXE3Q13461 319 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 KIR2DS1Q14954 304 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 ATAD3CQ5T2N8 411 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 C9orf66Q5T8R8 295 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 ASCL4Q6XD76 172 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 Q8NFD4 153 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 NEK7Q8TDX7 302 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 S1PR3Q99500 378 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 ZMAT5Q9UDW3 170 aaKnown RBP12.14□□□□□ -0.47
NME3-211ENST00000568561 SCOCQ9UIL1 159 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 GMPPBQ9Y5P6 360 aa12.14□□□□□ -0.47
NME3-211ENST00000568561 CIB2O75838 187 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 FADS2O95864 444 aaKnown RBP12.13□□□□□ -0.47
NME3-211ENST00000568561 MOSP00540 346 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 SLC2A2P11168 524 aaPredicted RBP12.13□□□□□ -0.47
NME3-211ENST00000568561 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
NME3-211ENST00000568561 ALDH3A2P51648 485 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 GBX2P52951 348 aaPredicted RBP12.13□□□□□ -0.47
NME3-211ENST00000568561 F2RL1P55085 397 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 CFHR3Q02985 330 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 CBR4Q8N4T8 237 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 LINC00311Q8N616 119 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 OR10V1Q8NGI7 309 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 OR52I1Q8NGK6 324 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 ST6GALNAC6Q969X2 333 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 CYYR1Q96J86 154 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 METTL9Q9H1A3 318 aa12.13□□□□□ -0.47
NME3-211ENST00000568561 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 CSTBP04080 98 aaKnown RBP12.12□□□□□ -0.47
NME3-211ENST00000568561 ELANEP08246 267 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 GZMHP20718 246 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 VDAC1P21796 283 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 MYF6P23409 242 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 IL3RAP26951 378 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
NME3-211ENST00000568561 FAM71E2Q8N5Q1 922 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms