RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 DGCR14Q96DF8 476 aaKnown RBP13.71□□□□□ -0.21
CLN6-208ENST00000567060 S100A16Q96FQ6 103 aaKnown RBP13.71□□□□□ -0.21
CLN6-208ENST00000567060 SULT4A1Q9BR01 284 aa13.71□□□□□ -0.21
CLN6-208ENST00000567060 PECRQ9BY49 303 aa13.71□□□□□ -0.21
CLN6-208ENST00000567060 HEXA-AS1Q9H8Q6 139 aa13.71□□□□□ -0.21
CLN6-208ENST00000567060 MBNL3Q9NUK0 354 aaKnown RBP13.71□□□□□ -0.21
CLN6-208ENST00000567060 ZNF581Q9P0T4 197 aa13.71□□□□□ -0.21
CLN6-208ENST00000567060 KBTBD11-OT1A0A1B0GTJ5 212 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 MFNGO00587 321 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 CLPXO76031 633 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 TPPPO94811 219 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 NAPSAO96009 420 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 FSHBP01225 129 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 CGB3P0DN86 165 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 CGB7P0DN87 165 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 MRPS15P82914 257 aaKnown RBP13.7□□□□□ -0.22
CLN6-208ENST00000567060 PNLIPRP3Q17RR3 467 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 Q8N7P7 452 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 TPRX1Q8N7U7 411 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 OR5H6Q8NGV6 325 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 SLC25A38Q96DW6 304 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 ARHGAP5-AS1Q96IT6 56 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 TBX15Q96SF7 602 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 FAAP24Q9BTP7 215 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 C12orf4Q9NQ89 552 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
CLN6-208ENST00000567060 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 A0A075B6Q4 140 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 UBE2QL1A1L167 161 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 NPIPB11E5RHQ5 1161 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 GLP1RP43220 463 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 PLA2G7Q13093 441 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 SRSF7Q16629 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLN6-208ENST00000567060 PLAC9Q5JTB6 97 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 GPR157Q5UAW9 335 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 VMO1Q7Z5L0 202 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 C11orf42Q8N5U0 333 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 SAMD12Q8N8I0 201 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 PCGF1Q9BSM1 259 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 KCNIP1Q9NZI2 227 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 ADAM30Q9UKF2 790 aa13.69□□□□□ -0.22
CLN6-208ENST00000567060 XRCC3O43542 346 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 AVPP01185 164 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 CD3GP09693 182 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 IGHV1-8P0DP01 117 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 CCL3L1P16619 93 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 SRP14P37108 136 aaKnown RBP13.68□□□□□ -0.22
CLN6-208ENST00000567060 Q3ZCU0 254 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 ZNF880Q6PDB4 577 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 C1orf229Q6ZS94 237 aaPredicted RBP13.68□□□□□ -0.22
CLN6-208ENST00000567060 C9orf139Q6ZV77 190 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 RTN4RL2Q86UN3 420 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 OR52M1Q8NGK5 317 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 OR13A1Q8NGR1 328 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 OR13D1Q8NGV5 346 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 MRPL30Q8TCC3 161 aaKnown RBP13.68□□□□□ -0.22
CLN6-208ENST00000567060 TNFRSF14Q92956 283 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 CMSS1Q9BQ75 279 aaKnown RBP13.68□□□□□ -0.22
CLN6-208ENST00000567060 CALYQ9NYX4 217 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 RABL2AQ9UBK7 228 aaPredicted RBP13.68□□□□□ -0.22
CLN6-208ENST00000567060 NUP50Q9UKX7 468 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 RABL2BQ9UNT1 228 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 SESN1Q9Y6P5 492 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
CLN6-208ENST00000567060 MGAM2Q2M2H8 2515 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 A0A087X0M5 115 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 A0A1B0GX30 115 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 SPINT2O43291 252 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 MELTFP08582 738 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 CD34P28906 385 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 UBE2E1P51965 193 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 C17orf58Q2M2W7 97 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 MOGAT2Q3SYC2 334 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 HACD4Q5VWC8 232 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 C15orf40Q8WUR7 153 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 COMMD3Q9UBI1 195 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 AK3Q9UIJ7 227 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 KCNK7Q9Y2U2 307 aa13.67□□□□□ -0.22
CLN6-208ENST00000567060 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 DIRAS3O95661 229 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 DTYMKP23919 212 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 FPR2P25090 351 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 ZNF260Q3ZCT1 412 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 CDNFQ49AH0 187 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 DYRK2Q92630 601 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 CHMP1AQ9HD42 196 aaPredicted RBP13.66□□□□□ -0.22
CLN6-208ENST00000567060 SIRT7Q9NRC8 400 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 ING3Q9NXR8 418 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 IDI2-AS1Q9NZ38 188 aa13.66□□□□□ -0.22
CLN6-208ENST00000567060 IGHV1-69DA0A0B4J2H0 117 aa13.65□□□□□ -0.22
CLN6-208ENST00000567060 CENPVL3A0A0U1RRI6 287 aa13.65□□□□□ -0.22
CLN6-208ENST00000567060 C15orf65H3BRN8 121 aa13.65□□□□□ -0.22
CLN6-208ENST00000567060 F2RL2O00254 374 aa13.65□□□□□ -0.22
CLN6-208ENST00000567060 KCNAB3O43448 404 aa13.65□□□□□ -0.22
CLN6-208ENST00000567060 IGHV1-69P01742 117 aa13.65□□□□□ -0.22
CLN6-208ENST00000567060 GNB3P16520 340 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 346.1 ms