RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 DUX4L4P0CJ87 422 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 DUX4L5P0CJ88 424 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 DUX4L6P0CJ89 424 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 DUX4L7P0CJ90 424 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 CBX5P45973 191 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 NKX2-5P52952 324 aaPredicted RBP10.73□□□□□ -0.69
SPG7-209ENST00000564047 MRPS15P82914 257 aaKnown RBP10.73□□□□□ -0.69
SPG7-209ENST00000564047 GRK1Q15835 563 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 SLC35E4Q6ICL7 350 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 DUX4L9Q6RFH8 374 aaPredicted RBP10.73□□□□□ -0.69
SPG7-209ENST00000564047 ZNF497Q6ZNH5 498 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 GAPTQ8N292 157 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 TMEM185AQ8NFB2 350 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 OR52I2Q8NH67 350 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 PLPPR1Q8TBJ4 325 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 NUDCD2Q8WVJ2 157 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
SPG7-209ENST00000564047 NEIL1Q96FI4 390 aaPredicted RBP10.73□□□□□ -0.69
SPG7-209ENST00000564047 BPESC1Q9GZL8 116 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 NCOR1P1Q9H4R4 102 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 C12orf4Q9NQ89 552 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 NUDT15Q9NV35 164 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 TAS2R8Q9NYW2 309 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 CTSZQ9UBR2 303 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 DUX4Q9UBX2 424 aa10.73□□□□□ -0.69
SPG7-209ENST00000564047 NBEAL1Q6ZS30 2694 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 TRBV6-6A0A0A6YYG2 114 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 A0A0A6YYJ9 748 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 TMEM30CPA0ZSE6 113 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 F5H0A9 414 aaPredicted RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 NAPSAO96009 420 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 MT-ND4P03905 459 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 WNT2P09544 360 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 SELLP14151 372 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 RPS2P15880 293 aaKnown RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 DTYMKP23919 212 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 GZMKP49863 264 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 IFITM2Q01629 132 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 ATXN7L3Q14CW9 347 aaPredicted RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 CDK10Q15131 360 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 CLEC12BQ2HXU8 276 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 LRRC10Q5BKY1 277 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 PRSS57Q6UWY2 283 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 NLRC3Q7RTR2 1065 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 TRAPPC6BQ86SZ2 158 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 OR8B3Q8NGG8 313 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 CAPSLQ8WWF8 208 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 DYRK2Q92630 601 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 COQ2Q96H96 371 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 DMRTB1Q96MA1 342 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 OR8B2Q96RD0 313 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 MED28Q9H204 178 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 PATZ1Q9HBE1 687 aaKnown RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 MCUBQ9NWR8 336 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 SLC25A10Q9UBX3 287 aaPredicted RBP10.72□□□□□ -0.69
SPG7-209ENST00000564047 MTFP1Q9UDX5 166 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 PCDHB10Q9UN67 800 aa10.72□□□□□ -0.69
SPG7-209ENST00000564047 A8MV72 311 aaPredicted RBP10.71□□□□□ -0.69
SPG7-209ENST00000564047 DVL1O14640 695 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 GPR37O15354 613 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 RBBP9O75884 186 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 FCGR3AP08637 254 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 CSF1P09603 554 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 NPY4RP50391 375 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 MECP2P51608 486 aaKnown RBP10.71□□□□□ -0.69
SPG7-209ENST00000564047 P2RX3P56373 397 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 CD83Q01151 205 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 AESQ08117 197 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 ATRQ13535 2644 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 SRSF7Q16629 238 aaKnown RBP eCLIP10.71□□□□□ -0.69
SPG7-209ENST00000564047 RNASE12Q5GAN4 147 aaKnown RBP10.71□□□□□ -0.69
SPG7-209ENST00000564047 KRBOX4Q5JUW0 171 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 ZNF841Q6ZN19 808 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 SPATA3Q8NHX4 192 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 MRPL30Q8TCC3 161 aaKnown RBP10.71□□□□□ -0.69
SPG7-209ENST00000564047 HDHD3Q9BSH5 251 aaPredicted RBP10.71□□□□□ -0.69
SPG7-209ENST00000564047 OR51J1Q9H342 316 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 SLA2Q9H6Q3 261 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 CHMP1AQ9HD42 196 aaPredicted RBP10.71□□□□□ -0.69
SPG7-209ENST00000564047 KLK11Q9UBX7 282 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 ANAPC10Q9UM13 185 aa10.71□□□□□ -0.69
SPG7-209ENST00000564047 USF3Q68DE3 2245 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 IGHV4-30-2A0A087WSY4 118 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 PEX14O75381 377 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 FCN3O75636 299 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 SLC25A16P16260 332 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 NDUFB7P17568 137 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 RCVRNP35243 200 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 GLIPR1P48060 266 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 ACTBP60709 375 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 ACTG1P63261 375 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 EDDM3AQ14507 147 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 ZNF880Q6PDB4 577 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 HOGA1Q86XE5 327 aa10.7□□□□□ -0.7
SPG7-209ENST00000564047 ZFAND1Q8TCF1 268 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms