RNA–Protein interactions for RNA: ENST00000560901.5

DCAF11-233, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-233	ENST00000560901	LYPD6	Q86Y78	171 aa		13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	NEK7	Q8TDX7	302 aa		13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	CAPSL	Q8WWF8	208 aa		13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	TOMM40L	Q969M1	308 aa		13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	RBM14	Q96PK6	669 aa	Known RBP	13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	OCSTAMP	Q9BR26	566 aa		13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	SPACA1	Q9HBV2	294 aa		13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	RCC2	Q9P258	522 aa	Known RBP	13.72	□□□□□ -0.21
DCAF11-233	ENST00000560901	PRKDC	P78527	4128 aa	Known RBP	13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	C15orf65	H3BRN8	121 aa		13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	MADCAM1	Q13477	382 aa		13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	INSL4	Q14641	139 aa		13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	MYDGF	Q969H8	173 aa		13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	SCN3B	Q9NY72	215 aa		13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	LSM2	Q9Y333	95 aa	Known RBP	13.71	□□□□□ -0.21
DCAF11-233	ENST00000560901	MT-ND4	P03905	459 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	OPN1MW	P04001	364 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	AMY1A	P04745	511 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	AMY2A	P04746	511 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	OPN1MW2	P0DN77	364 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	OPN1MW3	P0DN78	364 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	GABPB1	Q06547	395 aa	Predicted RBP	13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	SPHAR	Q15513	63 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	ABCA11P	Q4W5N1	156 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	C1QL4	Q86Z23	238 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	LYG1	Q8N1E2	194 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	MS4A15	Q8N5U1	240 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	TMEM104	Q8NE00	496 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	OR10X1	Q8NGY0	326 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	CCDC107	Q8WV48	283 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	SGCD	Q92629	289 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	ARL11	Q969Q4	196 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	UQCC2	Q9BRT2	126 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	SELENOI	Q9C0D9	397 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	BANF2	Q9H503	90 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901	NOTCH3	Q9UM47	2321 aa		13.7	□□□□□ -0.22
DCAF11-233	ENST00000560901		A0A1W2PPI3	338 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A18P	A6NE21	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A16P	A6NEW6	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A20P	A6NIJ5	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A9P	A6NNJ1	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A12P	A8MX19	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A5P	A8MXJ8	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	MCRIP1	C9JLW8	97 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	AIP	O00170	330 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	ORC5	O43913	435 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	CRTAP	O75718	401 aa	Predicted RBP	13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A15P	P0C7V4	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A13P	P0C7W8	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A14P	P0C7W9	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A24P	P0C7X0	464 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM106CP	P0CH98	169 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	MGMT	P16455	207 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	RAB7A	P51149	207 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	SLC35A2	P78381	396 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	DIAPH2-AS1	Q14236	149 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	NSUN5P1	Q3KNT7	163 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	ACSM3	Q53FZ2	586 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	RAB12	Q6IQ22	244 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	NDUFA11	Q86Y39	141 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	THNSL2	Q86YJ6	484 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	OR52M1	Q8NGK5	317 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	OR56B4	Q8NH76	319 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	CITED2	Q99967	270 aa	Predicted RBP	13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901	TMED9	Q9BVK6	235 aa		13.69	□□□□□ -0.22
DCAF11-233	ENST00000560901		A0A1W2PPE3	182 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A10P	A6NDY2	464 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A7P	A6NKC0	464 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM90A23P	A8MXZ1	464 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901		M0QZK8	103 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	SDCBP	O00560	298 aa	Predicted RBP	13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	LPL	P06858	475 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	SNRNP70	P08621	437 aa	Known RBP	13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	GP2	P55259	537 aa	Known RBP	13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	LOXL3	P58215	753 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	GPR50	Q13585	617 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	IRF3	Q14653	427 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	MED22	Q15528	200 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM27D1	Q5T7N8	215 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	UNQ9370/PRO34162	Q6UXP9	181 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	OR8H3	Q8N146	312 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	GAPT	Q8N292	157 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	DRAM1	Q8N682	238 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	UBALD1	Q8TB05	177 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901		Q96M66	194 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	ETAA1	Q9NY74	926 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	GHRL	Q9UBU3	117 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	PEX16	Q9Y5Y5	336 aa		13.68	□□□□□ -0.22
DCAF11-233	ENST00000560901	PLXNB1	O43157	2135 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	ADARB2-AS1	A8MUL3	147 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901		H0YHG0	523 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	HSD17B6	O14756	317 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	MYF6	P23409	242 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	VHL	P40337	213 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	EMX1	Q04741	257 aa	Predicted RBP	13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	SYT6	Q5T7P8	510 aa	Predicted RBP	13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	SIGIRR	Q6IA17	410 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	OR5AU1	Q8NGC0	362 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	PHYHIP	Q92561	330 aa		13.67	□□□□□ -0.22
DCAF11-233	ENST00000560901	FAM46B	Q96A09	425 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms