RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SLC2A2P11168 524 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-213ENST00000550629 PSG2P11465 335 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 USF1P22415 310 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-213ENST00000550629 CD80P33681 288 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 TGFBR1P36897 503 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 KCNJ3P48549 501 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 NPY4RP50391 375 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 ART1P52961 327 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 LOXL1Q08397 574 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-213ENST00000550629 UNC119Q13432 240 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 ARL6IP1Q15041 203 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 CARTPTQ16568 116 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 IDNKQ5T6J7 187 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 HES5Q5TA89 166 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 DEFB108BQ8NET1 73 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 OR56B1Q8NGI3 324 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 OR5D13Q8NGL4 314 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 RAB40AQ8WXH6 277 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 RAB39BQ96DA2 213 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM246Q9BRR3 403 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 SELENOIQ9C0D9 397 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 BPESC1Q9GZL8 116 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 NXF2Q9GZY0 626 aaKnown RBP4.75□□□□□ -1.65
SCAF11-213ENST00000550629 ABCG5Q9H222 651 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 MMP27Q9H306 513 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 NCOR1P1Q9H4R4 102 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF665Q9H7R5 613 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 DCAF16Q9NXF7 216 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 TREM2Q9NZC2 230 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 RCC2Q9P258 522 aaKnown RBP4.75□□□□□ -1.65
SCAF11-213ENST00000550629 OR5V1Q9UGF6 321 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 HSF4Q9ULV5 492 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 SPATA2Q9UM82 520 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 ST3GAL6Q9Y274 331 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 CSMD2Q7Z408 3487 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 IGHV3OR15-7A0A075B7D8 119 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 IGHV4-30-2A0A087WSY4 118 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 A0A096LNT2 108 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 PPIAL4CA0A0B4J2A2 164 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM272A0A1B0GTI8 110 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 FUOMA2VDF0 154 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 SMIM30A4D0T7 59 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 ISPDA4D126 451 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RFPL4AA6NLU0 287 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 CEACAM18A8MTB9 384 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 FOXI3A8MTJ6 420 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 A8MXK9 166 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RFPL4AL1F8VTS6 287 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 K7N7A8 449 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RRHO14718 337 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 GEMIN2O14893 280 aaKnown RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 ADAM20O43506 726 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 NDUFB3O43676 98 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 PDCD6O75340 191 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF737O75373 536 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 ECDO95905 644 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 OR2H2O95918 312 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 IGHV2-5P01817 119 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RPS2P15880 293 aaKnown RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 SERPINA2P20848 420 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 FUT3P21217 361 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 PITPNBP48739 271 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 CAV3P56539 151 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 CLDN12P56749 244 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 KRTAP10-6P60371 365 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 LMO4P61968 165 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RBM39Q14498 530 aaKnown RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 PIGYQ3MUY2 71 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 ESCO2Q56NI9 601 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 LRRC10Q5BKY1 277 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 UBE2NLQ5JXB2 153 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 FAM201AQ5SY85 155 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 AVPI1Q5T686 147 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 Q6P435 159 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 SPNS3Q6ZMD2 512 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 LINC00299Q6ZSB3 139 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 OR8H2Q8N162 312 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 CD177Q8N6Q3 437 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 SAMD12Q8N8I0 201 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 OR5T2Q8NGG2 359 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 OR8B3Q8NGG8 313 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 OR10K1Q8NGX5 313 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 LGALS14Q8TCE9 139 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 ABHD5Q8WTS1 349 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 C15orf40Q8WUR7 153 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 FAM46BQ96A09 425 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 S100A16Q96FQ6 103 aaKnown RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 GAFA1Q96PS6 74 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 OR8B2Q96RD0 313 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 NKX3-1Q99801 234 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 REG4Q9BYZ8 158 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 SLIRPQ9GZT3 109 aaKnown RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 LPAR5Q9H1C0 372 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 BANF2Q9H503 90 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 PATZ1Q9HBE1 687 aaKnown RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 DIABLOQ9NR28 239 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RHBDL2Q9NX52 303 aa4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RABL2AQ9UBK7 228 aaPredicted RBP4.74□□□□□ -1.65
SCAF11-213ENST00000550629 RABL2BQ9UNT1 228 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms