RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, human

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGFBR1-208	ENST00000550253	CMTM1	Q8IZ96	169 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	C6orf223	Q8N319	242 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	LRRC25	Q8N386	305 aa	Predicted RBP	4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	LRRC75A	Q8NAA5	344 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	OR1M1	Q8NGA1	313 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	OR2G2	Q8NGZ5	317 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	OR10J5	Q8NHC4	309 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ACTRT1	Q8TDG2	376 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	DOK4	Q8TEW6	326 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	RNASE6	Q93091	150 aa	Known RBP	4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ZHX1-C8orf76	Q96EF9	292 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SDHAF2	Q9NX18	166 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MYEF2	Q9P2K5	600 aa	Known RBP	4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ZNF229	Q9UJW7	825 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	BAIAP2	Q9UQB8	552 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	WIF1	Q9Y5W5	379 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253		V9GY05	133 aa		4.62	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ATR	Q13535	2644 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	NIN	Q8N4C6	2090 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	TRGV5	A0A0B4J1U4	118 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253		A0A1B0GV90	55 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253		J3QRK9	145 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253		M0R3G1	203 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MRPS12	O15235	138 aa	Known RBP	4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SIVA1	O15304	175 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	RGS5	O15539	181 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	FCN3	O75636	299 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SCEL	O95171	688 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	EPPIN	O95925	133 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	IGHV3-13	P01766	116 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ATP6V1B2	P21281	511 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	OMP	P47874	163 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SERPINB10	P48595	397 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CEBPG	P53567	150 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CRISP1	P54107	249 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SLC18A1	P54219	525 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	BTN3A2	P78410	334 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	FAM83E	Q2M2I3	478 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ZNF791	Q3KP31	576 aa	Predicted RBP	4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	TTLL9	Q3SXZ7	439 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CHRFAM7A	Q494W8	412 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	DNLZ	Q5SXM8	178 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	GPR107	Q5VW38	600 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SBSN	Q6UWP8	590 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	UNQ9370/PRO34162	Q6UXP9	181 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PRR22	Q8IZ63	422 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SPAG16	Q8N0X2	631 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	WDSUB1	Q8N9V3	476 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	NEIL3	Q8TAT5	605 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ZNF721	Q8TF20	911 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	RAB2B	Q8WUD1	216 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MAFIP	Q8WZ33	124 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	FGGY	Q96C11	551 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MS4A6E	Q96DS6	147 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SLC25A38	Q96DW6	304 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	OR8D2	Q9GZM6	311 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ROGDI	Q9GZN7	287 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PCBD2	Q9H0N5	130 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	C20orf85	Q9H1P6	137 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PRTFDC1	Q9NRG1	225 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	NKIRAS1	Q9NYS0	192 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	KIF25	Q9UIL4	384 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MOB4	Q9Y3A3	225 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MMACHC	Q9Y4U1	282 aa		4.61	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CSPG4	Q6UVK1	2322 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	TLN2	Q9Y4G6	2542 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	C9orf170	A2RU37	121 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	FAM231B	A6NCW3	169 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253		H3BNH8	94 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PHF1	O43189	567 aa	Predicted RBP	4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CHP2	O43745	196 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	BANF1	O75531	89 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MED6	O75586	246 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SCO1	O75880	301 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CLIC3	O95833	236 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CLPS	P04118	112 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	C8G	P07360	202 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SERPINA6	P08185	405 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CD3G	P09693	182 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	GABRA1	P14867	456 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CD36	P16671	472 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PAX6	P26367	422 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	NPBWR2	P48146	333 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	SLC25A1	P53007	311 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	RAB38	P57729	211 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PSPH	P78330	225 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ZNF45	Q02386	682 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	CDNF	Q49AH0	187 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PIGG	Q5H8A4	983 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253		Q6ZN92	141 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	MRPL21	Q7Z2W9	205 aa	Known RBP	4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	THOC6	Q86W42	341 aa	Known RBP	4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	PUSL1	Q8N0Z8	303 aa	Known RBP	4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	STX19	Q8N4C7	294 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	ZNF561	Q8N587	486 aa		4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	EIF4E3	Q8N5X7	224 aa	Known RBP	4.6	□□□□□ -1.67
TGFBR1-208	ENST00000550253	OR10G3	Q8NGC4	313 aa		4.6	□□□□□ -1.67

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