RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 MED28Q9H204 178 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 Q9N2K0 584 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 DLL4Q9NR61 685 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 KIF25Q9UIL4 384 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 TANC2Q9HCD6 1990 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 SIGLEC5O15389 551 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 TMPRSS2O15393 492 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 PPIHO43447 177 aaKnown RBP13.25□□□□□ -0.29
XRCC1-202ENST00000543982 TSPAN5P62079 268 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 EDDM3AQ14507 147 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 SHEQ5VZ18 495 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 FAM53AQ6NSI3 398 aaPredicted RBP13.25□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF880Q6PDB4 577 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 ST6GAL2Q96JF0 529 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 SNX22Q96L94 193 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 GPN1Q9HCN4 374 aaPredicted RBP13.25□□□□□ -0.29
XRCC1-202ENST00000543982 CHMP1AQ9HD42 196 aaPredicted RBP13.25□□□□□ -0.29
XRCC1-202ENST00000543982 EHFQ9NZC4 300 aa13.25□□□□□ -0.29
XRCC1-202ENST00000543982 SCTP09683 121 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 ARPC4P59998 168 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 RBM39Q14498 530 aaKnown RBP13.24□□□□□ -0.29
XRCC1-202ENST00000543982 CDK10Q15131 360 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
XRCC1-202ENST00000543982 CD276Q5ZPR3 534 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF561Q8N587 486 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 ZDHHC22Q8N966 263 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 APCP25054 2843 aa13.24□□□□□ -0.29
XRCC1-202ENST00000543982 IGKV1-6A0A0C4DH72 117 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 SNRPGP15A8MWD9 76 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 SDCBPO00560 298 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-202ENST00000543982 ADAM20O43506 726 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 VSIG10L2P0DP72 767 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 KRBOX4Q5JUW0 171 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 TMEM185AQ8NFB2 350 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 RIMS4Q9H426 269 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-202ENST00000543982 NARFLQ9H6Q4 476 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 CHODLQ9H9P2 273 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF286AQ9HBT8 521 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 MYOZ1Q9NP98 299 aaPredicted RBP13.23□□□□□ -0.29
XRCC1-202ENST00000543982 TRBV6-6A0A0A6YYG2 114 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 CEACAM18A8MTB9 384 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 SEC61A1P61619 476 aaKnown RBP13.23□□□□□ -0.29
XRCC1-202ENST00000543982 HERPUD1Q15011 391 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 IGSF11Q5DX21 431 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 SLC35E4Q6ICL7 350 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 Q6ZS49 121 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 LHFPL1Q86WI0 220 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 OR13A1Q8NGR1 328 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 SEC22CQ9BRL7 303 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF221Q9UK13 617 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 VSIG4Q9Y279 399 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 VPS13CQ709C8 3753 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 HECTD1Q9ULT8 2610 aa13.23□□□□□ -0.29
XRCC1-202ENST00000543982 A8MV72 311 aaPredicted RBP13.22□□□□□ -0.29
XRCC1-202ENST00000543982 CREBL2O60519 120 aaPredicted RBP13.22□□□□□ -0.29
XRCC1-202ENST00000543982 IL13RA1P78552 427 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 CD83Q01151 205 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 FCN2Q15485 313 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF626Q68DY1 528 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF841Q6ZN19 808 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 TCF23Q7RTU1 214 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
XRCC1-202ENST00000543982 NECAP2Q9NVZ3 263 aa13.22□□□□□ -0.29
XRCC1-202ENST00000543982 MEIKINA0A087WXM9 373 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 DVL1O14640 695 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 MGST3O14880 152 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 SSNA1O43805 119 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 MDH2P40926 338 aaKnown RBP13.21□□□□□ -0.29
XRCC1-202ENST00000543982 TMEM33P57088 247 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 MRGPRDQ8TDS7 321 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 PERPQ96FX8 193 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 TMPRSS13Q9BYE2 586 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.29
XRCC1-202ENST00000543982 TRAPPC2LQ9UL33 140 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 OR4E1P0C645 316 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 OR5H8P0DN80 308 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 SSTR2P30874 369 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 EDDM3BP56851 147 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 UTF1Q5T230 341 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 AADACL3Q5VUY0 350 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 MARCH1Q8TCQ1 289 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 CAPSLQ8WWF8 208 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 SCGB3A2Q96PL1 93 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 FYTTD1Q96QD9 318 aaKnown RBP13.21□□□□□ -0.29
XRCC1-202ENST00000543982 KAAG1Q9UBP8 84 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 ZNF69Q9UC07 566 aa13.21□□□□□ -0.29
XRCC1-202ENST00000543982 MAP1AP78559 2803 aaPredicted RBP13.21□□□□□ -0.3
XRCC1-202ENST00000543982 ARID1AO14497 2285 aa13.21□□□□□ -0.3
XRCC1-202ENST00000543982 POM121CA8CG34 1229 aa13.2□□□□□ -0.3
XRCC1-202ENST00000543982 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
XRCC1-202ENST00000543982 NPY4RP50391 375 aa13.2□□□□□ -0.3
XRCC1-202ENST00000543982 ATP5J2P56134 94 aa13.2□□□□□ -0.3
XRCC1-202ENST00000543982 P2RX3P56373 397 aa13.2□□□□□ -0.3
XRCC1-202ENST00000543982 ERVFRD-1P60508 538 aa13.2□□□□□ -0.3
XRCC1-202ENST00000543982 C4orf46Q504U0 113 aa13.2□□□□□ -0.3
XRCC1-202ENST00000543982 ZNF660Q6AZW8 331 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms