RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ZNF880Q6PDB4 577 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC23A3Q6PIS1 610 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SPSB3Q6PJ21 355 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF818PQ6ZRF7 136 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZFP82Q8N141 532 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF561Q8N587 486 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 TMEM252Q8N6L7 170 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 HSD17B11Q8NBQ5 300 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 C1orf162Q8NEQ5 155 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 OR56B2PQ8NGI1 322 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 OR5D13Q8NGL4 314 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 OR1J1Q8NGS3 322 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 TMEM171Q8WVE6 324 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 IP6K3Q96PC2 410 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 PBDC1Q9BVG4 233 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SPRY4Q9C004 299 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC25A31Q9H0C2 315 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 GLRX2Q9NS18 164 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 MTCH1Q9NZJ7 389 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ATP23Q9Y6H3 246 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SHANK1Q9Y566 2161 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF292O60281 2723 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 CACNA1AO00555 2505 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 IGKV1D-13A0A0B4J2D9 117 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 KIR2DS1A0A191URI9 304 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 KIAA1324LA8MWY0 1029 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 PATE3B3GLJ2 98 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 H0Y980 276 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 ADAM20O43506 726 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 MRPL33O75394 65 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 EIF3GO75821 320 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 TRAPPC6AO75865 159 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 TMEM50AO95807 157 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 IGHV2-5P01817 119 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 PRH1P02810 166 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SNRNP70P08621 437 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SCTP09683 121 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 IGKV1-13P0DP09 117 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC25A6P12236 298 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 RAB5AP20339 215 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 VDAC1P21796 283 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 ACP1P24666 158 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 ATP6V0CP27449 155 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 GDF1P27539 372 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 OTX2P32243 289 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 AKR1C3P42330 323 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 KIR2DS4P43632 304 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 CYB561P49447 251 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SULT1A1P50225 295 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 LHX2P50458 406 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 PAX9P55771 341 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 CLDN18P56856 261 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SNRPEP62304 92 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 POLR2GP62487 172 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 BAXQ07812 192 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 CLINT1Q14677 625 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 KIR2DS1Q14954 304 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 HIKESHIQ53FT3 197 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 CXorf66Q5JRM2 361 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 DCAF12Q5T6F0 453 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 PCSK4Q6UW60 755 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 MEX3BQ6ZN04 569 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 TMEM182Q6ZP80 229 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 TIPARPQ7Z3E1 657 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 LINC00596Q86U02 117 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 C1QL4Q86Z23 238 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF695Q8IW36 515 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 MKXQ8IYA7 352 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 ZDHHC23Q8IYP9 409 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 GAPTQ8N292 157 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 NAXEQ8NCW5 288 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 OR5A2Q8NGI9 324 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 FAM213BQ8TBF2 198 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 CT55Q8WUE5 264 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SLAMF9Q96A28 289 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 APOBEC3DQ96AK3 386 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 PAPOLGQ9BWT3 736 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 PRRG4Q9BZD6 226 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 EIF5A2Q9GZV4 153 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 RIMS4Q9H426 269 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 OPA3Q9H6K4 179 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF703Q9H7S9 590 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SEBOXQ9HB31 216 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 KCNJ16Q9NPI9 418 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 METTL1Q9UBP6 276 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 BOKQ9UMX3 212 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 NOSIPQ9Y314 301 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 UBE2J1Q9Y385 318 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 RNF115Q9Y4L5 304 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 OTOGLQ3ZCN5 2332 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 DMXL1Q9Y485 3027 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SPEGQ15772 3267 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 SDK2Q58EX2 2172 aa4.43□□□□□ -1.7
ATPAF1-212ENST00000542495 TRAV1-1A0A0B4J248 108 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A1W2PPE3 182 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A1W2PPH5 198 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF503-AS2A6NEH8 195 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms