RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LEUTXA8MZ59 168 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 C4orf51C9J302 202 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 F5H5K5 113 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 K7ERS5 55 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 ITGB1BP1O14713 200 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 PDYNP01213 254 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 TRGV3P03979 118 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 GABRA1P14867 456 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 ZNF3P17036 446 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 AKR1C4P17516 323 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 INPP1P49441 399 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 DLX6P56179 175 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 LRRC26Q2I0M4 334 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 ELP2Q6IA86 826 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 WDR59Q6PJI9 974 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 OLIG3Q7RTU3 272 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 LFNGQ8NES3 379 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 OR5L1Q8NGL2 311 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 DTD1Q8TEA8 209 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 REEP6Q96HR9 211 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 OR2V2Q96R30 315 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 LLPHQ9BRT6 129 aaKnown RBP2.03□□□□□ -2.08
PRKDC-205ENST00000535375 OR2D2Q9H210 308 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 IMP3Q9NV31 184 aaKnown RBP2.03□□□□□ -2.08
PRKDC-205ENST00000535375 R4GN34 69 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 EFCAB9A8MZ26 197 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 SLC31A1O15431 190 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 ORM1P02763 201 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 HRES1P13985 223 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 ATF1P18846 271 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 CBX5P45973 191 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 MP68P56378 58 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 UBE2G2P60604 165 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 SKP1P63208 163 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 TNFRSF9Q07011 255 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 PAFAH1B3Q15102 231 aaKnown RBP2.02□□□□□ -2.09
PRKDC-205ENST00000535375 ZCWPW2Q504Y3 356 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 HES3Q5TGS1 186 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 LAIR2Q6ISS4 152 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 FAM45BPQ6NSW5 357 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 VN1R4Q7Z5H5 301 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 CD302Q8IX05 232 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 KRTCAP2Q8N6L1 136 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 CMTM2Q8TAZ6 248 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 CMBLQ96DG6 245 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 SLC19A3Q9BZV2 496 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 BTRCQ9Y297 605 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 TRAPPC1Q9Y5R8 145 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 ICOSQ9Y6W8 199 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 ZSWIM8A7E2V4 1837 aa2.02□□□□□ -2.09
PRKDC-205ENST00000535375 MYO16Q9Y6X6 1858 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 IGHV3OR15-7A0A075B7D8 119 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 OR5H14A6NHG9 310 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 KLRC4-KLRK1H3BQV0 150 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 C15orf65H3BRN8 121 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 LTAP01374 205 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 IGHV3-53P01767 116 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 MLNP12872 115 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 RPL14P50914 215 aaKnown RBP2.01□□□□□ -2.09
PRKDC-205ENST00000535375 EMP2P54851 167 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 FOXA1P55317 472 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 RAB25P57735 213 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 SKP2Q13309 424 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 EXOC3L4Q17RC7 722 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 PYDC2Q56P42 97 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 PDZD11Q5EBL8 140 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 Q6ZQT7 251 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 OR4P4Q8NGL7 312 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 STACQ99469 402 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 ZNF426Q9BUY5 554 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 TSSK6Q9BXA6 273 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 DMAC2Q9NW81 257 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 NAGKQ9UJ70 344 aa2.01□□□□□ -2.09
PRKDC-205ENST00000535375 ZNF443Q9Y2A4 671 aaPredicted RBP2.01□□□□□ -2.09
PRKDC-205ENST00000535375 CLUHO75153 1309 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 GOLGA6L10A6NI86 522 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 H3BMM0 161 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 PSIP1O75475 530 aaKnown RBP2□□□□□ -2.09
PRKDC-205ENST00000535375 EVI2BP34910 448 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 PSMD7P51665 324 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 KLF3P57682 345 aaPredicted RBP2□□□□□ -2.09
PRKDC-205ENST00000535375 DHRS2Q13268 280 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 SLC9A3R2Q15599 337 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 ZNF660Q6AZW8 331 aaPredicted RBP2□□□□□ -2.09
PRKDC-205ENST00000535375 IQCF2Q8IXL9 164 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 BLIDQ8IZY5 108 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 OR52E4Q8NGH9 312 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 OR11L1Q8NGX0 322 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 KCTD4Q8WVF5 259 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 UBE2WQ96B02 151 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 GPR22Q99680 433 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 CHST5Q9GZS9 411 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 GABARAPL1Q9H0R8 117 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 ALX4Q9H161 411 aaPredicted RBP2□□□□□ -2.09
PRKDC-205ENST00000535375 C15orf41Q9Y2V0 281 aa2□□□□□ -2.09
PRKDC-205ENST00000535375 NOSIPQ9Y314 301 aaKnown RBP2□□□□□ -2.09
PRKDC-205ENST00000535375 THADAQ6YHU6 1953 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 ZBED9Q6R2W3 1325 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 NACADO15069 1562 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms