RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	OOSP1	A8MZH6	123 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	MAGEB4	O15481	346 aa	Predicted RBP	9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	DHRS3	O75911	302 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	MAPK3	P27361	379 aa	Predicted RBP	9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	LUM	P51884	338 aa	Predicted RBP	9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	NANOS3	P60323	173 aa	Known RBP	9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	IL24	Q13007	206 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	C9orf152	Q5JTZ5	239 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	CCDC144NL	Q6NUI1	221 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	ZNF695	Q8IW36	515 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	OR8U1	Q8NH10	309 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	OR5AK2	Q8NH90	309 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	SNX22	Q96L94	193 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	PRR25	Q96S07	402 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	ASCL2	Q99929	193 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	SEBOX	Q9HB31	216 aa	Predicted RBP	9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	PCDHB16	Q9NRJ7	776 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	FAM206A	Q9NX38	181 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	IKZF2	Q9UKS7	526 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	PIGL	Q9Y2B2	252 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	SMAD5-AS1	Q9Y6J3	95 aa		9.83	□□□□□ -0.84
CAPN1-223	ENST00000533079	HUWE1	Q7Z6Z7	4374 aa	Known RBP	9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	LOC110117498-PIK3R3	F6TDL0	507 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	SRSF10	O75494	262 aa	Known RBP	9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	IGLV1-47	P01700	117 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	ISG15	P05161	165 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	MYL9	P24844	172 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	CD24	P25063	80 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	PTBP1	P26599	531 aa	Known RBP eCLIP	9.82	□□□□□ -0.84	4e-7	■■□□□ 12.9
CAPN1-223	ENST00000533079	MNDA	P41218	407 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	PSMD7	P51665	324 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079		Q499Y3	187 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	CLVS2	Q5SYC1	327 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	TMEM42	Q69YG0	159 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	MZT2A	Q6P582	158 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	KRT77	Q7Z794	578 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	ZNF329	Q86UD4	541 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	CATSPERD	Q86XM0	798 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	ABHD12	Q8N2K0	398 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	CMTM3	Q96MX0	182 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	C6orf62	Q9GZU0	229 aa	Predicted RBP	9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	COMMD4	Q9H0A8	199 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	PPIL3	Q9H2H8	161 aa	Known RBP	9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	GAL3ST2	Q9H3Q3	398 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	ZNF256	Q9Y2P7	627 aa	Predicted RBP	9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	UBE2J1	Q9Y385	318 aa	Predicted RBP	9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079		R4GMQ9	66 aa		9.82	□□□□□ -0.84
CAPN1-223	ENST00000533079	TRBV5-7	A0A0A0MS05	114 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	TMEM269	A0A1B0GVZ9	245 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	SHISA3	A0PJX4	238 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	DHRS7C	A6NNS2	312 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	CCL24	O00175	119 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	PSMD9	O00233	223 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	CTDSP2	O14595	271 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	PDCD5	O14737	125 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	FGF16	O43320	207 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	CLEC2L	P0C7M8	214 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	FAM106CP	P0CH98	169 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	SRM	P19623	302 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	CALR	P27797	417 aa	Known RBP	9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	CD34	P28906	385 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	ERP29	P30040	261 aa	Known RBP	9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	TNFSF8	P32971	234 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	ECI1	P42126	302 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	EDDM3A	Q14507	147 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	HSD17B12	Q53GQ0	312 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	SPANXN2	Q5MJ10	180 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	DDI2	Q5TDH0	399 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	C18orf65	Q6ZTR6	163 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	PRSS35	Q8N3Z0	413 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	OR51E1	Q8TCB6	317 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	GPR148	Q8TDV2	347 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	RAX2	Q96IS3	184 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	PDCD1LG2	Q9BQ51	273 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	SOST	Q9BQB4	213 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	MOB1A	Q9H8S9	216 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	GPR84	Q9NQS5	396 aa		9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	NUFIP1	Q9UHK0	495 aa	Known RBP	9.81	□□□□□ -0.84
CAPN1-223	ENST00000533079	DSCAML1	Q8TD84	2053 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	MEX3A	A1L020	520 aa	Known RBP	9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	SH2D7	A6NKC9	451 aa	Predicted RBP	9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	NOTO	A8MTQ0	251 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	SERPINE3	A8MV23	424 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	RPP14	O95059	124 aa	Known RBP	9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	CD37	P11049	281 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	INSL3	P51460	131 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	RAB25	P57735	213 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	PPP3R1	P63098	170 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	MXD1	Q05195	221 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	INSL4	Q14641	139 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	GRK1	Q15835	563 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	HLA-DRB5	Q30154	266 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	TPTE2P1	Q5T6R2	138 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	TMEM244	Q5VVB8	128 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	HEPN1	Q6WQI6	88 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	TRAPPC6B	Q86SZ2	158 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	THNSL2	Q86YJ6	484 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	FOXRED2	Q8IWF2	684 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079		Q8IYB0	196 aa		9.8	□□□□□ -0.84
CAPN1-223	ENST00000533079	RGP1	Q92546	391 aa	Predicted RBP	9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms