RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 KIR3DP1A8MWS1 328 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 E9PLN8 166 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 RAB27BO00194 218 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 HSD17B6O14756 317 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 HMGB3O15347 200 aaKnown RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 FCGR3BO75015 233 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ALDOBP05062 364 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SLC35G6P0C7Q6 338 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SNRPBP14678 240 aaKnown RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ACRV1P26436 265 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 NTSP30990 170 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SDC2P34741 201 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 NSG1P42857 185 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 RPS10P46783 165 aaKnown RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SLC6A9P48067 706 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 TFPI2P48307 235 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 CSRP3P50461 194 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 GFERP55789 205 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SNRPNP63162 240 aaKnown RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 MEF2DQ14814 521 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 HIST3H3Q16695 136 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 LINC00303Q3SY05 128 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 PYDC2Q56P42 97 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 KHDC1LQ5JSQ8 128 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 TMEM201Q5SNT2 666 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 PLAG1Q6DJT9 500 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF549Q6P9A3 640 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ESPNLQ6ZVH7 1005 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 CXorf67Q86X51 503 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ZADH2Q8N4Q0 377 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 STPG4Q8N801 248 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 GPR32P1Q8NGA4 272 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 OR5A1Q8NGJ0 315 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 GPR148Q8TDV2 347 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 PSMF1Q92530 271 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 TSLPQ969D9 159 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 PNPLA2Q96AD5 504 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 RPEQ96AT9 228 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ADAT1Q9BUB4 502 aaKnown RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 C20orf27Q9GZN8 174 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 NELFAQ9H3P2 528 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 ELL3Q9HB65 397 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 HRASLS2Q9NWW9 162 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 FKBP11Q9NYL4 201 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 BTRCQ9Y297 605 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 TRBV5-4A0A0C4DH59 114 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 A0A1B0GU03 582 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 FAM95CA0A1B0GW59 222 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 UBE2QL1A1L167 161 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 RNF222A6NCQ9 220 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 ASPDHA6ND91 283 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE12JA6NER3 117 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 SNRPGP15A8MWD9 76 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 IDSB3KWA1 339 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 H0YIG0 161 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 J3QLI3 93 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAPDHSO14556 408 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF207O43670 478 aaKnown RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 ZG16O60844 167 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE7O76087 117 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 WISP1O95388 367 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 MAS1P04201 325 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 CRYGDP07320 174 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 CTSDP07339 412 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE12FP0CL80 117 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE12GP0CL81 117 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE12IP0CL82 117 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 ERGP11308 486 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 MMP9P14780 707 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GADD45AP24522 165 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GABRA3P34903 492 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 THBS3P49746 956 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 MANFP55145 182 aaKnown RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 HIST1H1AQ02539 215 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE4Q13068 117 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 RGNQ15493 299 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OR8B8Q15620 311 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OPN5Q6U736 354 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 FOXI2Q6ZQN5 318 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 MOB1BQ7L9L4 216 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 MDGA2Q7Z553 956 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 CALHM3Q86XJ0 350 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 NOXO1Q8NFA2 376 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OR4B1Q8NGF8 309 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OR4X1Q8NH49 305 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OR4A16Q8NH70 328 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 LYPD6BQ8NI32 183 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 HMGCLL1Q8TB92 370 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 ADTRPQ96IZ2 230 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OR4K3Q96R72 315 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 SAMD10Q9BYL1 202 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 FNDC4Q9H6D8 234 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 TESQ9UGI8 421 aaKnown RBP6.49□□□□□ -1.37
HDAC3-216ENST00000523088 PRSS50Q9UI38 385 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 OAZ3Q9UMX2 235 aa6.49□□□□□ -1.37
HDAC3-216ENST00000523088 EMC9Q9Y3B6 208 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms