RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 THNSL2Q86YJ6 484 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 MS4A15Q8N5U1 240 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 LEAP2Q969E1 77 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 MYDGFQ969H8 173 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 SLC25A33Q9BSK2 321 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 SPACA1Q9HBV2 294 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 SCN3BQ9NY72 215 aa13.63□□□□□ -0.23
SQLE-205ENST00000521232 C15orf65H3BRN8 121 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 FBXO24O75426 580 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 IGHV3-7P01780 117 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 CD28P10747 220 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 VDAC2P45880 294 aaPredicted RBP13.62□□□□□ -0.23
SQLE-205ENST00000521232 AQP4P55087 323 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 LTC4SQ16873 150 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 ACSM3Q53FZ2 586 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 AWAT2Q6E213 333 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 OR52M1Q8NGK5 317 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 RPEQ96AT9 228 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 OR5M11Q96RB7 305 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 UQCC2Q9BRT2 126 aa13.62□□□□□ -0.23
SQLE-205ENST00000521232 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
SQLE-205ENST00000521232 NOTCH3Q9UM47 2321 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A10PA6NDY2 464 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A7PA6NKC0 464 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 FAM90A23PA8MXZ1 464 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 MCRIP1C9JLW8 97 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 ORC5O43913 435 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 PEX14O75381 377 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 AMY1AP04745 511 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 AMY2AP04746 511 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 FAM106CPP0CH98 169 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 GP2P55259 537 aaKnown RBP13.61□□□□□ -0.23
SQLE-205ENST00000521232 SLC35A2P78381 396 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 EMX1Q04741 257 aaPredicted RBP13.61□□□□□ -0.23
SQLE-205ENST00000521232 MADCAM1Q13477 382 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 GPR50Q13585 617 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 IRF3Q14653 427 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 SPHARQ15513 63 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 ARSJQ5FYB0 599 aaPredicted RBP13.61□□□□□ -0.23
SQLE-205ENST00000521232 TMEM104Q8NE00 496 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 CCDC107Q8WV48 283 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 CAPSLQ8WWF8 208 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 TOMM40LQ969M1 308 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 ARL11Q969Q4 196 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 GHRLQ9UBU3 117 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 PLXNB1O43157 2135 aa13.61□□□□□ -0.23
SQLE-205ENST00000521232 H0YHG0 523 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 OPN1MWP04001 364 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 GLAP06280 429 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 OPN1MW2P0DN77 364 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 OPN1MW3P0DN78 364 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 MGMTP16455 207 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 RAB7AP51149 207 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 LOXL3P58215 753 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 GABPB1Q06547 395 aaPredicted RBP13.6□□□□□ -0.23
SQLE-205ENST00000521232 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 INSL4Q14641 139 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 TMEM95Q3KNT9 176 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 ABCA11PQ4W5N1 156 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 PDLIM3Q53GG5 364 aaPredicted RBP13.6□□□□□ -0.23
SQLE-205ENST00000521232 RAB12Q6IQ22 244 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 GAPTQ8N292 157 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 NEK7Q8TDX7 302 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 SGCDQ92629 289 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 SELENOIQ9C0D9 397 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 BANF2Q9H503 90 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 DUSP21Q9H596 190 aa13.6□□□□□ -0.23
SQLE-205ENST00000521232 A0A1W2PPI3 338 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 M0QZK8 103 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 AIPO00170 330 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 CA11O75493 328 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 SC5DO75845 299 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 MYF6P23409 242 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 GNG10P50151 68 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 MED22Q15528 200 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 SYT6Q5T7P8 510 aaPredicted RBP13.59□□□□□ -0.23
SQLE-205ENST00000521232 NDUFA11Q86Y39 141 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 OR8H3Q8N146 312 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 LYG1Q8N1E2 194 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 LINC00311Q8N616 119 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 C8orf31Q8N9H6 132 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 OR10X1Q8NGY0 326 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 PHYHIPQ92561 330 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 Q96M66 194 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
SQLE-205ENST00000521232 GFOD1Q9NXC2 390 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 ETAA1Q9NY74 926 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 TPRKBQ9Y3C4 175 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 PEX16Q9Y5Y5 336 aa13.59□□□□□ -0.23
SQLE-205ENST00000521232 A0A1W2PPE3 182 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 SDCBPO00560 298 aaPredicted RBP13.58□□□□□ -0.24
SQLE-205ENST00000521232 CRTAPO75718 401 aaPredicted RBP13.58□□□□□ -0.24
SQLE-205ENST00000521232 LPLP06858 475 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 SNRNP70P08621 437 aaKnown RBP13.58□□□□□ -0.24
SQLE-205ENST00000521232 CD37P11049 281 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 FUT3P21217 361 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 CD83Q01151 205 aa13.58□□□□□ -0.24
SQLE-205ENST00000521232 NSUN5P1Q3KNT7 163 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms